RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 Q4G0T1 1027 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 PRR16Q569H4 304 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 LARP1BQ659C4 914 aaKnown RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 METTL7BQ6UX53 244 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 CXCL17Q6UXB2 119 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 SLC39A5Q6ZMH5 540 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 NEK8Q86SG6 692 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 HSCBQ8IWL3 235 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
ATG4A-206ENST00000457035 SPATA33Q96N06 139 aa11.42□□□□□ -0.58
ATG4A-206ENST00000457035 GRIN2DO15399 1336 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 NFASCO94856 1347 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 ELP1O95163 1332 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 KIF28PB7ZC32 967 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 MSH4O15457 936 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 KPNA6O60684 536 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 CABYRO75952 493 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 TDP2O95551 362 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 DGKDQ16760 1214 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 LETM2Q2VYF4 491 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 BRDTQ58F21 947 aaPredicted RBP11.41□□□□□ -0.58
ATG4A-206ENST00000457035 C1orf53Q5VUE5 145 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 PPP4R3AQ6IN85 833 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 GPR20Q99678 358 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
ATG4A-206ENST00000457035 GSTTP1A0A1W2PQM5 241 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 IPO5O00410 1097 aaKnown RBP11.4□□□□□ -0.58
ATG4A-206ENST00000457035 WNT7AO00755 349 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 MYL3P08590 195 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 CDK7P50613 346 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 SETQ01105 290 aaPredicted RBP11.4□□□□□ -0.58
ATG4A-206ENST00000457035 SNX17Q15036 470 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 LRRC26Q2I0M4 334 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 NOSTRINQ8IVI9 506 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 SLC43A3Q8NBI5 491 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 KAT2BQ92831 832 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 STARD7Q9NQZ5 370 aa11.4□□□□□ -0.58
ATG4A-206ENST00000457035 SLC37A4O43826 429 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
ATG4A-206ENST00000457035 ATG7O95352 703 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 GCFC2P16383 781 aaKnown RBP11.39□□□□□ -0.59
ATG4A-206ENST00000457035 SYT1P21579 422 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 C7orf61Q8IZ16 206 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 ETNPPLQ8TBG4 499 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 SEPT1Q8WYJ6 367 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 EVPLQ92817 2033 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 GJA10Q969M2 543 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
ATG4A-206ENST00000457035 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
ATG4A-206ENST00000457035 KCNMB3Q9NPA1 279 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 TBC1D22BQ9NU19 505 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
ATG4A-206ENST00000457035 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
ATG4A-206ENST00000457035 H3BQV1 296 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 ARVCFO00192 962 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 HAS3O00219 553 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 NOP56O00567 594 aaKnown RBP11.38□□□□□ -0.59
ATG4A-206ENST00000457035 PSMD10O75832 226 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 CCNE2O96020 404 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 PDCP20941 246 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 TOB1P50616 345 aaPredicted RBP11.38□□□□□ -0.59
ATG4A-206ENST00000457035 PSMC6P62333 389 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 SP4Q02446 784 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
ATG4A-206ENST00000457035 B3GNT9Q6UX72 402 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 ABHD15Q6UXT9 468 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 HAS1Q92839 578 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 PCYT2Q99447 389 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 RIT2Q99578 217 aa11.38□□□□□ -0.59
ATG4A-206ENST00000457035 NAP1L4Q99733 375 aaKnown RBP11.38□□□□□ -0.59
ATG4A-206ENST00000457035 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 A0A0U1RQG5 324 aaPredicted RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 H3BRB1 525 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 DDX39AO00148 427 aaKnown RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 TBX3O15119 743 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 LGR5O75473 907 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 F2P00734 622 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 LGALS2P05162 132 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ZNF286BP0CG31 522 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ATP2B1P20020 1258 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 TCF7P36402 384 aaPredicted RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 RTP1P59025 263 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ACTR2P61160 394 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ZNF746Q6NUN9 644 aaPredicted RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms