RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NACAE9PAV3 2078 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 RALGAPA1Q6GYQ0 2036 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TJP3O95049 919 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 MLECQ14165 292 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PPP4R4Q6NUP7 873 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 UBE3BQ7Z3V4 1068 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TUFT1Q9NNX1 390 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 STK36Q9NRP7 1315 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 SPDYE4A6NLX3 237 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 SNX1Q13596 522 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TBC1D9BQ66K14 1250 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CEP95Q96GE4 821 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 OSBPL5Q9H0X9 879 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 MYO1FO00160 1098 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CALB1P05937 261 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 GNGT1P63211 74 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 KRT35Q92764 455 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TRIM56Q9BRZ2 755 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TIPINQ9BVW5 301 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 KCNJ18B7U540 433 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 GPC4O75487 556 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TOMM70O94826 608 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 RAB14P61106 215 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 KCNJ12Q14500 433 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MYOCDQ8IZQ8 938 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ZBTB18Q99592 522 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SLC12A5Q9H2X9 1139 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 THAP9Q9H5L6 903 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CCDC134Q9H6E4 229 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 EML4Q9HC35 981 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PPP2R2CQ9Y2T4 447 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CDH16O75309 829 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 STX3Q13277 289 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ODR4Q5SWX8 454 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 JADE1Q6IE81 842 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MRPL46Q9H2W6 279 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SNX5Q9Y5X3 404 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SHROOM3Q8TF72 1996 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 FAM25AB3EWG3 89 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 FAM25CB3EWG5 89 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 FAM25GB3EWG6 89 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PPP6R3Q5H9R7 873 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ACAD11Q709F0 780 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CEP19Q96LK0 163 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TINF2Q9BSI4 451 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 KRT87PA6NCN2 255 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ECEL1O95672 775 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 INAQ16352 499 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 LONRF2Q1L5Z9 754 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TTC38Q5R3I4 469 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TRIM50Q86XT4 487 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 GIMAP8Q8ND71 665 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CNBD2Q96M20 576 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ING2Q9H160 280 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 BHMT2Q9H2M3 363 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PKD2L2Q9NZM6 624 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SERPINA10Q9UK55 444 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MTSS1O43312 755 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 STAM2O75886 525 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 KRT7P08729 469 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 AP3M2P53677 418 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 USP14P54578 494 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ZNF483Q8TF39 744 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 KCNK16Q96T55 309 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 GINS4Q9BRT9 223 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MBIPQ9NS73 344 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 LRRC7Q96NW7 1537 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SYCE1LA8MT33 242 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PTK2Q05397 1052 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ERICH1Q86X53 443 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CATSPER2Q96P56 530 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CYTH3O43739 400 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MX2P20592 715 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CHRNA3P32297 505 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ADKP55263 362 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MAN2A1Q16706 1144 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 KBTBD12Q3ZCT8 623 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TAF1BQ53T94 588 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 WDR60Q8WVS4 1066 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 NLRP3Q96P20 1036 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 APOBEC2Q9Y235 224 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PPLO60437 1756 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 FAM187AA6NFU0 413 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SAC3D1A6NKF1 404 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ARL13BQ3SXY8 428 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TRMT10CQ7L0Y3 403 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SNIP1Q8TAD8 396 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 RSL24D1Q9UHA3 163 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 IQGAP1P46940 1657 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ZMYM6O95789 1325 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SMCO2A6NFE2 343 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ADCY7P51828 1080 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 FAR2Q96K12 515 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CCDC90BQ9GZT6 254 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CFAP69A5D8W1 941 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 O00370 1275 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ATXN3P54252 364 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 BYSLQ13895 437 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms