RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 BRF1Q92994 677 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 ANO3Q9BYT9 981 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
PDGFB-204ENST00000455790 MUC3AQ02505 3323 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 MYO9BQ13459 2157 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 RSPH10B2B2RC85 870 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 LGR5O75473 907 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
PDGFB-204ENST00000455790 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
PDGFB-204ENST00000455790 RSPH10BP0C881 870 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 MARK3P27448 753 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 METAP2P50579 478 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDGFB-204ENST00000455790 ADAM17P78536 824 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
PDGFB-204ENST00000455790 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
PDGFB-204ENST00000455790 NID2Q14112 1375 aa13.67□□□□□ -0.22
PDGFB-204ENST00000455790 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-204ENST00000455790 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 SMCO2A6NFE2 343 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 TLL1O43897 1013 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
PDGFB-204ENST00000455790 RCAN1P53805 252 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 FGD1P98174 961 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 KRT40Q6A162 431 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 FAM117BQ6P1L5 589 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDGFB-204ENST00000455790 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
PDGFB-204ENST00000455790 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 PCYT2Q99447 389 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 KCNH7Q9NS40 1196 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 TTC28Q96AY4 2481 aa13.66□□□□□ -0.22
PDGFB-204ENST00000455790 EMSYQ7Z589 1322 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 GJB5O95377 273 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 ARP10275 920 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 SREBF1P36956 1147 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-204ENST00000455790 IKBKEQ14164 716 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 PKN1Q16512 942 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-204ENST00000455790 PLEKHG4Q58EX7 1191 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-204ENST00000455790 SEPT1Q8WYJ6 367 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
PDGFB-204ENST00000455790 JPH1Q9HDC5 661 aaPredicted RBP13.65□□□□□ -0.22
PDGFB-204ENST00000455790 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 REC8O95072 547 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 SCG2P13521 617 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 GRIK4Q16099 956 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 CEP55Q53EZ4 464 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 PHKBQ93100 1093 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 NCOA5Q9HCD5 579 aaKnown RBP13.64□□□□□ -0.23
PDGFB-204ENST00000455790 AGO4Q9HCK5 861 aaKnown RBP13.64□□□□□ -0.23
PDGFB-204ENST00000455790 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 SIP14410 1827 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
PDGFB-204ENST00000455790 MICAL3Q7RTP6 2002 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 LPXNO60711 386 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 CAND2O75155 1236 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
PDGFB-204ENST00000455790 CHRNA1P02708 482 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 GNAT1P11488 350 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 ACTR2P61160 394 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 MYOCDQ8IZQ8 938 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 FBXL16Q8N461 479 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 CRYGNQ8WXF5 182 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 GLG1Q92896 1179 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 ERAP1Q9NZ08 941 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 NFASCO94856 1347 aa13.63□□□□□ -0.23
PDGFB-204ENST00000455790 PRRC2BQ5JSZ5 2229 aaKnown RBP13.62□□□□□ -0.23
PDGFB-204ENST00000455790 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-204ENST00000455790 MBLAC1A4D2B0 266 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-204ENST00000455790 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
PDGFB-204ENST00000455790 DDX39AO00148 427 aaKnown RBP13.62□□□□□ -0.23
PDGFB-204ENST00000455790 MEIS1O00470 390 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms