RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 Q6ZSN1 163 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 POLNQ7Z5Q5 900 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 RASGRP4Q8TDF6 673 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 CPLX3Q8WVH0 158 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 GPRASP2Q96D09 838 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 FAM89AQ96GI7 184 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 CCDC140Q96MF4 163 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 KCND1Q9NSA2 647 aa3.88□□□□□ -1.79
LINC02540-201ENST00000455554 H0Y858 1186 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 ITGAVP06756 1048 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 C1SP09871 688 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF888P0CJ79 500 aaPredicted RBP3.87□□□□□ -1.79
LINC02540-201ENST00000455554 KCNJ6P48051 423 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 GLRBP48167 497 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 NASPP49321 788 aaPredicted RBP3.87□□□□□ -1.79
LINC02540-201ENST00000455554 GRIN1Q05586 938 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 PRSS53Q2L4Q9 553 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF227Q86WZ6 799 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 LDLRAD3Q86YD5 345 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 STPG3Q8N7X2 389 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 FAM169BQ8N8A8 192 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 CACTINQ8WUQ7 758 aaKnown RBP3.87□□□□□ -1.79
LINC02540-201ENST00000455554 ZG16BQ96DA0 208 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 PLEKHG4BQ96PX9 1271 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 CARD11Q9BXL7 1154 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 SLC6A20Q9NP91 592 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 ARHGAP20Q9P2F6 1191 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 SLC30A1Q9Y6M5 507 aa3.87□□□□□ -1.79
LINC02540-201ENST00000455554 SLC27A2O14975 620 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 ADH4P08319 380 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 FAHP16930 419 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 CR2P20023 1033 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 ACRV1P26436 265 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 SF1Q15637 639 aaKnown RBP3.86□□□□□ -1.79
LINC02540-201ENST00000455554 FNDC7Q5VTL7 733 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 MAMDC4Q6UXC1 1216 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 IL17DQ8TAD2 202 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 PIP4K2CQ8TBX8 421 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 CLEC4DQ8WXI8 215 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 CRAMP1Q96RY5 1269 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 CDIP1Q9H305 208 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 LRP2BPQ9P2M1 347 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 OAZ3Q9UMX2 235 aa3.86□□□□□ -1.79
LINC02540-201ENST00000455554 U2SURPO15042 1029 aaKnown RBP3.85□□□□□ -1.79
LINC02540-201ENST00000455554 ENO2P09104 434 aaPredicted RBP3.85□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF16P17020 682 aaPredicted RBP3.85□□□□□ -1.79
LINC02540-201ENST00000455554 GFRA1P56159 465 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 PFKPQ01813 784 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 TUBA3CQ13748 450 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 SV2CQ496J9 727 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 PAN2Q504Q3 1202 aaKnown RBP3.85□□□□□ -1.79
LINC02540-201ENST00000455554 DENND5AQ6IQ26 1287 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 TUBA3EQ6PEY2 450 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 RBM12BQ8IXT5 1001 aaKnown RBP3.85□□□□□ -1.79
LINC02540-201ENST00000455554 TMEM145Q8NBT3 493 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 OR14A2Q96R54 314 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 DPYSL5Q9BPU6 564 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 JAM3Q9BX67 310 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 MMRN2Q9H8L6 949 aa3.85□□□□□ -1.79
LINC02540-201ENST00000455554 CDC14BO60729 498 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 CUTAO60888 179 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 IL18BPO95998 194 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 MAKP20794 623 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 POLD1P28340 1107 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 TUSC3Q13454 348 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 NOLC1Q14978 699 aaKnown RBP eCLIP3.84□□□□□ -1.79
LINC02540-201ENST00000455554 RNF151Q2KHN1 245 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 CD276Q5ZPR3 534 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 PCSK4Q6UW60 755 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 MRGPRGQ86SM5 289 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF483Q8TF39 744 aaPredicted RBP3.84□□□□□ -1.79
LINC02540-201ENST00000455554 LARP4BQ92615 738 aaKnown RBP3.84□□□□□ -1.79
LINC02540-201ENST00000455554 C1orf159Q96HA4 380 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 TACO1Q9BSH4 297 aaKnown RBP3.84□□□□□ -1.79
LINC02540-201ENST00000455554 NUB1Q9Y5A7 615 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 NPFFR2Q9Y5X5 522 aa3.84□□□□□ -1.79
LINC02540-201ENST00000455554 ZNF839A8K0R7 811 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 GJA8P48165 433 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 DUSP8Q13202 625 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 ZMAT1Q5H9K5 638 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 SLC35F1Q5T1Q4 408 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 ZNF627Q7L945 461 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 OTOP3Q7RTS5 596 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 ZNF808Q8N4W9 903 aaPredicted RBP3.83□□□□□ -1.8
LINC02540-201ENST00000455554 AGAP2Q99490 1192 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 PLA2G12BQ9BX93 195 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 PDGFDQ9GZP0 370 aaPredicted RBP3.83□□□□□ -1.8
LINC02540-201ENST00000455554 STRIP2Q9ULQ0 834 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 NR2E1Q9Y466 385 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 DMRT1Q9Y5R6 373 aa3.83□□□□□ -1.8
LINC02540-201ENST00000455554 ESYT3A0FGR9 886 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 LTFP02788 710 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 DNAJA1P31689 397 aaKnown RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 RPS19P39019 145 aaKnown RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 RRADP55042 308 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 TOP3AQ13472 1001 aaPredicted RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 DPY19L2P1Q6NXN4 242 aa3.82□□□□□ -1.8
LINC02540-201ENST00000455554 C6orf15Q6UXA7 325 aaPredicted RBP3.82□□□□□ -1.8
LINC02540-201ENST00000455554 UHMK1Q8TAS1 419 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms