RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TRIM32Q13049 653 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 GRB10Q13322 594 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 PDIA5Q14554 519 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 KLHL40Q2TBA0 621 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 LONRF3Q496Y0 759 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 NAALADL2Q58DX5 795 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 KCNK18Q7Z418 384 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
SCN9A-205ENST00000454569 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
SCN9A-205ENST00000454569 BRCA2P51587 3418 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 ASB14A6NK59 587 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 GAS7O60861 476 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 ZNF202O95125 648 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 UBA1P22314 1058 aaKnown RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 ADCYAP1R1P41586 468 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 CLCN6P51797 869 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 FAM160A1Q05DH4 1040 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 PPP2R5CQ13362 524 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 CABP7Q86V35 215 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 GRAMD1CQ8IYS0 662 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 TRIB2Q92519 343 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 WBP1LQ9NX94 342 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
SCN9A-205ENST00000454569 DDX41Q9UJV9 622 aaKnown RBP12.36□□□□□ -0.43
SCN9A-205ENST00000454569 HAX1O00165 279 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 ZBTB39O15060 712 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 STAM2O75886 525 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 RGS2P41220 211 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SYKP43405 635 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SP4Q02446 784 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 DSG2Q14126 1118 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CAMK4Q16566 473 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 TMEM266Q2M3C6 531 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CATSPER3Q86XQ3 398 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 TRPV1Q8NER1 839 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 STAMQ92783 540 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 DHX58Q96C10 678 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 RIT2Q99578 217 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 MTRQ99707 1265 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 ARID2Q68CP9 1835 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 MAFGO15525 162 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SLITRK3O94933 977 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 MBD3O95983 291 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 ELNP15502 786 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 PLCG1P19174 1290 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CASP1P29466 404 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 UBA7P41226 1012 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 PSMC6P62333 389 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CYP4A11Q02928 519 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 UGCGQ16739 394 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 CCDC73Q6ZRK6 1079 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SOCS4Q8WXH5 440 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 LENG1Q96BZ8 264 aaPredicted RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 AK8Q96MA6 479 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 APBA2Q99767 749 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 EIF2AK1Q9BQI3 630 aaKnown RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 GZF1Q9H116 711 aaPredicted RBP12.35□□□□□ -0.43
SCN9A-205ENST00000454569 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 FAM13BQ9NYF5 915 aa12.35□□□□□ -0.43
SCN9A-205ENST00000454569 NFASCO94856 1347 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 MYH11P35749 1972 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 FKTNO75072 461 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 FARP2O94887 1054 aaPredicted RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 GGPS1O95749 300 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 ZNF865P0CJ78 1059 aaPredicted RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 SMPD1P17405 629 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 SKOR2Q2VWA4 1001 aaPredicted RBP12.34□□□□□ -0.43
SCN9A-205ENST00000454569 OLFML2BQ68BL8 750 aa12.34□□□□□ -0.43
SCN9A-205ENST00000454569 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms