RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 FAM50BQ9Y247 325 aa29.56■■■□□ 2.32
NEK6-211ENST00000454453 GTF2F1P35269 517 aaKnown RBP eCLIP29.55■■■□□ 2.327e-8■■■■□ 20.4
NEK6-211ENST00000454453 BMPR1AP36894 532 aa29.55■■■□□ 2.32
NEK6-211ENST00000454453 CNNM2Q9H8M5 875 aa29.55■■■□□ 2.32
NEK6-211ENST00000454453 RTEL1Q9NZ71 1219 aa29.55■■■□□ 2.32
NEK6-211ENST00000454453 MBTPS2O43462 519 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 ARHGAP4P98171 946 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 EHMT1Q9H9B1 1298 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 SENP2Q9HC62 589 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 DIAPH3Q9NSV4 1193 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 ZNF318Q5VUA4 2279 aa29.54■■■□□ 2.32
NEK6-211ENST00000454453 TBX10O75333 385 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 RB1P06400 928 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 GNAT1P11488 350 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 NEDD9Q14511 834 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 GRM4Q14833 912 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 B4GALNT3Q6L9W6 998 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 RUFY4Q6ZNE9 571 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 SMC5Q8IY18 1101 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 CLP1Q92989 425 aaKnown RBP29.53■■■□□ 2.32
NEK6-211ENST00000454453 KCNH6Q9H252 994 aa29.53■■■□□ 2.32
NEK6-211ENST00000454453 ADGRA3Q8IWK6 1321 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 LINC01565O15544 149 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 GHRP10912 638 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 MGAT3Q09327 533 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 CAMK1Q14012 370 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 GNPTABQ3T906 1256 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 UTP14CQ5TAP6 766 aaKnown RBP29.52■■■□□ 2.32
NEK6-211ENST00000454453 ZNF689Q96CS4 500 aaPredicted RBP29.52■■■□□ 2.32
NEK6-211ENST00000454453 C11orf84Q9BUA3 381 aaPredicted RBP29.52■■■□□ 2.32
NEK6-211ENST00000454453 LMAN2LQ9H0V9 348 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 MUTYHQ9UIF7 546 aa29.52■■■□□ 2.32
NEK6-211ENST00000454453 BAZ2BQ9UIF8 2168 aaKnown RBP29.52■■■□□ 2.32
NEK6-211ENST00000454453 NCK2O43639 380 aa29.51■■■□□ 2.31
NEK6-211ENST00000454453 ENPP3O14638 875 aa29.5■■■□□ 2.31
NEK6-211ENST00000454453 FIBPO43427 364 aa29.5■■■□□ 2.31
NEK6-211ENST00000454453 STAM2O75886 525 aa29.5■■■□□ 2.31
NEK6-211ENST00000454453 LPIN1Q14693 890 aa29.5■■■□□ 2.31
NEK6-211ENST00000454453 PNMA6FA0A0J9YX94 578 aa29.49■■■□□ 2.31
NEK6-211ENST00000454453 CSPG5O95196 566 aa29.49■■■□□ 2.31
NEK6-211ENST00000454453 SP4Q02446 784 aa29.49■■■□□ 2.31
NEK6-211ENST00000454453 HERC4Q5GLZ8 1057 aaPredicted RBP29.49■■■□□ 2.31
NEK6-211ENST00000454453 CHD1LQ86WJ1 897 aa29.49■■■□□ 2.31
NEK6-211ENST00000454453 ZNF215Q9UL58 517 aaPredicted RBP29.49■■■□□ 2.31
NEK6-211ENST00000454453 NRCAMQ92823 1304 aa29.48■■■□□ 2.31
NEK6-211ENST00000454453 RNF135Q8IUD6 432 aa29.48■■■□□ 2.31
NEK6-211ENST00000454453 LINC01599Q8WXQ3 324 aa29.48■■■□□ 2.31
NEK6-211ENST00000454453 UPF3BQ9BZI7 483 aaKnown RBP29.48■■■□□ 2.31
NEK6-211ENST00000454453 IGFLR1Q9H665 355 aa29.48■■■□□ 2.31
NEK6-211ENST00000454453 MMP1P03956 469 aa29.47■■■□□ 2.31
NEK6-211ENST00000454453 TROAPQ12815 778 aa29.47■■■□□ 2.31
NEK6-211ENST00000454453 SMAD4Q13485 552 aaKnown RBP29.47■■■□□ 2.31
NEK6-211ENST00000454453 PHOX2BQ99453 314 aa29.47■■■□□ 2.31
NEK6-211ENST00000454453 SENP7Q9BQF6 1050 aa29.47■■■□□ 2.31
NEK6-211ENST00000454453 ALG13Q9NP73 1137 aaKnown RBP29.47■■■□□ 2.31
NEK6-211ENST00000454453 RWDD3Q9Y3V2 267 aa29.47■■■□□ 2.31
NEK6-211ENST00000454453 DGKIO75912 1065 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 DNAJB1P25685 340 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 TRAF1Q13077 416 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 ADAM15Q13444 863 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 USP34Q70CQ2 3546 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 TECTAO75443 2155 aa29.46■■■□□ 2.31
NEK6-211ENST00000454453 KIAA1671Q9BY89 1806 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 TTC3P53804 2025 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 HIP1O00291 1037 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 NUCB1Q02818 461 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 BTG3Q14201 252 aaPredicted RBP29.45■■■□□ 2.31
NEK6-211ENST00000454453 FBXO47Q5MNV8 452 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 CRIPAKQ8N1N5 446 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 PIBF1Q8WXW3 757 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 MSLNLQ96KJ4 702 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 PLAGL2Q9UPG8 496 aa29.45■■■□□ 2.31
NEK6-211ENST00000454453 ATP9AO75110 1047 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 IGHDP01880 384 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 TCF7P36402 384 aaPredicted RBP29.44■■■□□ 2.3
NEK6-211ENST00000454453 MARCH8Q5T0T0 291 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 PCNX4Q63HM2 1172 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 TAF2Q6P1X5 1199 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 USP17L6PQ6QN14 398 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 ADGRD2Q7Z7M1 963 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 POP1Q99575 1024 aaKnown RBP29.44■■■□□ 2.3
NEK6-211ENST00000454453 AGO3Q9H9G7 860 aaKnown RBP29.44■■■□□ 2.3
NEK6-211ENST00000454453 CD207Q9UJ71 328 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 TAF6LQ9Y6J9 622 aa29.44■■■□□ 2.3
NEK6-211ENST00000454453 STXBP3O00186 592 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 RTN4RL1Q86UN2 441 aaPredicted RBP29.43■■■□□ 2.3
NEK6-211ENST00000454453 DNAJB3Q8WWF6 145 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 ZBTB10Q96DT7 871 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 MFSD14AQ96MC6 490 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 PLVAPQ9BX97 442 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 CLEC1BQ9P126 229 aa29.43■■■□□ 2.3
NEK6-211ENST00000454453 MRPL42Q9Y6G3 142 aaKnown RBP29.43■■■□□ 2.3
NEK6-211ENST00000454453 MBLAC1A4D2B0 266 aaPredicted RBP29.42■■■□□ 2.3
NEK6-211ENST00000454453 MEIS2O14770 477 aa29.42■■■□□ 2.3
NEK6-211ENST00000454453 PPFIA1Q13136 1202 aa29.42■■■□□ 2.3
NEK6-211ENST00000454453 PRSS33Q8NF86 280 aa29.42■■■□□ 2.3
NEK6-211ENST00000454453 EDAQ92838 391 aa29.42■■■□□ 2.3
NEK6-211ENST00000454453 CDY2AQ9Y6F7 541 aa29.42■■■□□ 2.3
NEK6-211ENST00000454453 GSTTP1A0A1W2PQM5 241 aa29.41■■■□□ 2.3
NEK6-211ENST00000454453 IFIT3O14879 490 aaKnown RBP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms