RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 KCNMB3Q9NPA1 279 aa31.68■■■□□ 2.66
SMARCC1-203ENST00000454240 H3BRB1 525 aa31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 WNT7AO00755 349 aa31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 PTPN11Q06124 597 aaPredicted RBP31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 KIAA0753Q2KHM9 967 aa31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 UTP14CQ5TAP6 766 aaKnown RBP31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 ZNF746Q6NUN9 644 aaPredicted RBP31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 TUT1Q9H6E5 874 aaKnown RBP31.67■■■□□ 2.66
SMARCC1-203ENST00000454240 DCDC2CA8MYV0 355 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 PSMD10O75832 226 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 CD4P01730 458 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 KRT76Q01546 638 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 FAAP100Q0VG06 881 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 ABHD15Q6UXT9 468 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 SESTD1Q86VW0 696 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 GJA10Q969M2 543 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 FOXD4L1Q9NU39 408 aa31.66■■■□□ 2.66
SMARCC1-203ENST00000454240 TBX3O15119 743 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 LGR5O75473 907 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 PDCP20941 246 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 LRCH2Q5VUJ6 765 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 TRIM50Q86XT4 487 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 PPP1R13LQ8WUF5 828 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 FAM20AQ96MK3 541 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 PCYT2Q99447 389 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 EMSYQ7Z589 1322 aa31.65■■■□□ 2.66
SMARCC1-203ENST00000454240 IGKV6D-21A0A0A0MT36 114 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 GAS7O60861 476 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 CHMP4BP1P59074 171 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 MCTP1Q6DN14 999 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 POTEDQ86YR6 584 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 HAS1Q92839 578 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 TEKT3Q9BXF9 490 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 PDLIM7Q9NR12 457 aa31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 ZNF215Q9UL58 517 aaPredicted RBP31.64■■■□□ 2.66
SMARCC1-203ENST00000454240 MYH9P35579 1960 aaKnown RBP31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 TLR3O15455 904 aaKnown RBP31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 CLTBP09497 229 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 TRAPPC10P48553 1259 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 FAM47CQ5HY64 1035 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 B3GNT9Q6UX72 402 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 SMAP1Q8IYB5 467 aaPredicted RBP31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 SMARCAD1Q9H4L7 1026 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 KAT6AQ92794 2004 aa31.63■■■□□ 2.65
SMARCC1-203ENST00000454240 B4GALT4O60513 344 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 SUPT20HL2P0C7V6 817 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 ATP2B1P20020 1258 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 TRIP12Q14669 1992 aaPredicted RBP31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 C7orf31Q8N865 590 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 TRPV6Q9H1D0 765 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 HDAC6Q9UBN7 1215 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 GTF2IRD1Q9UHL9 959 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 TCEAL9Q9UHQ7 104 aa31.62■■■□□ 2.65
SMARCC1-203ENST00000454240 H0YGN5 161 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 MIS18BP1Q6P0N0 1132 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 PLPPR4Q7Z2D5 763 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 SH3RF1Q7Z6J0 888 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 GLG1Q92896 1179 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 UNC45AQ9H3U1 944 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 RNPEPQ9H4A4 650 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 AZI2Q9H6S1 392 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 ERAP1Q9NZ08 941 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 NOL7Q9UMY1 257 aaKnown RBP31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 PCDHA10Q9Y5I2 948 aa31.61■■■□□ 2.65
SMARCC1-203ENST00000454240 NEMFO60524 1076 aa31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 SYT1P21579 422 aa31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 TOB1P50616 345 aaPredicted RBP31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 ORC2Q13416 577 aaPredicted RBP31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 SLFN12Q8IYM2 578 aa31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 TRMT13Q9NUP7 481 aaKnown RBP31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 ZMYND8Q9ULU4 1186 aaPredicted RBP31.6■■■□□ 2.65
SMARCC1-203ENST00000454240 TRIM43BA6NCK2 446 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 WDR64B1ANS9 1081 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 KIAA0355O15063 1070 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 SYN1P17600 705 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 STAT5BP51692 787 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 TTC38Q5R3I4 469 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 GDF6Q6KF10 455 aaPredicted RBP31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 CCDC60Q8IWA6 550 aaPredicted RBP31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 AFAP1L1Q8TED9 768 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 TRIM43Q96BQ3 446 aaPredicted RBP31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 TMEM39AQ9NV64 488 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 TBX21Q9UL17 535 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 LTBP2Q14767 1821 aa31.59■■■□□ 2.65
SMARCC1-203ENST00000454240 BAG4O95429 457 aaKnown RBP31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 PSAPP07602 524 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 HOXC8P31273 242 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 SFNP31947 248 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 MCM7P33993 719 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 CALCRLQ16602 461 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 SWSAP1Q6NVH7 229 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 MTMR9Q96QG7 549 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 PRDM5Q9NQX1 630 aaPredicted RBP31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 DISC1Q9NRI5 854 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 PRKAG2Q9UGJ0 569 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 VAV3Q9UKW4 847 aa31.58■■■□□ 2.65
SMARCC1-203ENST00000454240 HSP90AA1P07900 732 aaKnown RBP31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 SMIM10L2AP0DMW4 78 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 SMIM10L2BP0DMW5 78 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 JAK3P52333 1124 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms