RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 GLG1Q92896 1179 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 PHKBQ93100 1093 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SDF4Q9BRK5 362 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
DDX39A-203ENST00000454233 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 JPH1Q9HDC5 661 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-203ENST00000454233 KCNH7Q9NS40 1196 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SETD4Q9NVD3 440 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
DDX39A-203ENST00000454233 NFASCO94856 1347 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 GSTTP1A0A1W2PQM5 241 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 RSPH10B2B2RC85 870 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 CPLX1O14810 134 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 TREHO43280 583 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 NBNO60934 754 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 EFCAB14O75071 495 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 CAND2O75155 1236 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 CXCL10P02778 98 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 RSPH10BP0C881 870 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 RABGGTBP53611 331 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 ARHGAP4P98171 946 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 NTRK3Q16288 839 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 PKN1Q16512 942 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 NIPA1Q7RTP0 329 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 MAFAQ8NHW3 353 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 CYP2W1Q8TAV3 490 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 BICD2Q8TD16 824 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 WNT8BQ93098 351 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 GAS2L1Q99501 681 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 AZI2Q9H6S1 392 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 ERAP1Q9NZ08 941 aa12.18□□□□□ -0.46
DDX39A-203ENST00000454233 YBX2Q9Y2T7 364 aaKnown RBP12.18□□□□□ -0.46
DDX39A-203ENST00000454233 NRCAMQ92823 1304 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 ABHD14A-ACY1A0A1B0GW23 586 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 MEIS1O00470 390 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 ARP10275 920 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
DDX39A-203ENST00000454233 IKBKEQ14164 716 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 GPNMBQ14956 572 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 PPP2R2DQ66LE6 453 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 LMBR1Q8WVP7 490 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
DDX39A-203ENST00000454233 AGO4Q9HCK5 861 aaKnown RBP12.17□□□□□ -0.46
DDX39A-203ENST00000454233 TET1Q8NFU7 2136 aa12.17□□□□□ -0.46
DDX39A-203ENST00000454233 LGR5O75473 907 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 CYP3A4P08684 503 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 CTSHP09668 335 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 MYOGP15173 224 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 MARK3P27448 753 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 NLRP5P59047 1200 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 ACTR2P61160 394 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 WDR5P61964 334 aaKnown RBP12.16□□□□□ -0.46
DDX39A-203ENST00000454233 PPFIA1Q13136 1202 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 RSPH3Q86UC2 560 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 ZBED2Q9BTP6 218 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 PRDM12Q9H4Q4 367 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 TCEAL9Q9UHQ7 104 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
DDX39A-203ENST00000454233 GBF1Q92538 1859 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 LAMA2P24043 3122 aaKnown RBP12.15□□□□□ -0.46
DDX39A-203ENST00000454233 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 TLL1O43897 1013 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 DEXIO95424 95 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 ANAPC15P60006 121 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 ADAM17P78536 824 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-203ENST00000454233 STK3Q13188 491 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-203ENST00000454233 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 GRIK4Q16099 956 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 TAF2Q6P1X5 1199 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 SEPT8Q92599 483 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
DDX39A-203ENST00000454233 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
DDX39A-203ENST00000454233 MYO9BQ13459 2157 aa12.15□□□□□ -0.47
DDX39A-203ENST00000454233 FAM86B1E9PN63 330 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
DDX39A-203ENST00000454233 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
DDX39A-203ENST00000454233 BACH1O14867 736 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 CDKL5O76039 1030 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 RPLP2P05387 115 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms