RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 TBC1D9BQ66K14 1250 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
HCG18-239ENST00000454129 USP17L6PQ6QN14 398 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 PODNQ7Z5L7 613 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 EXOC8Q8IYI6 725 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 PIGOQ8TEQ8 1089 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 ANKRD36BP1Q96IX9 119 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 NBPF3Q9H094 633 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 GLI2P10070 1586 aa7.15□□□□□ -1.26
HCG18-239ENST00000454129 GOLGA8IPA6NC78 632 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 GOLGA8JA6NMD2 632 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 POC1B-GALNT4F8VUJ3 575 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 HEXIM1O94992 359 aaKnown RBP7.15□□□□□ -1.27
HCG18-239ENST00000454129 NDUFA10O95299 355 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 NT5C2P49902 561 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 YWHAGP61981 247 aaKnown RBP eCLIP7.15□□□□□ -1.27
HCG18-239ENST00000454129 KRT31Q15323 416 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 POLD4Q9HCU8 107 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 REREQ9P2R6 1566 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 SPDYE16A6NNV3 312 aaPredicted RBP7.15□□□□□ -1.27
HCG18-239ENST00000454129 CCND2P30279 289 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 PLTPP55058 493 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 PEX3P56589 373 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 LRRC63Q05C16 580 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.27
HCG18-239ENST00000454129 SPDYE2Q495Y8 402 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 PHLDB2Q86SQ0 1253 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 ZBTB33Q86T24 672 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 CCDC170Q8IYT3 715 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 ABI1Q8IZP0 508 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 BBOF1Q8ND07 529 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 CAPS2Q9BXY5 557 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 THAP9Q9H5L6 903 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 MED4Q9NPJ6 270 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 NEDD4P46934 1319 aa7.15□□□□□ -1.27
HCG18-239ENST00000454129 MAP3K4Q9Y6R4 1608 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PTPRMP28827 1452 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 POTEMA6NI47 508 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 GOLGA8KD6RF30 607 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CD58P19256 250 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 IFNAR2P48551 515 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 MKRN3Q13064 507 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 TRIM28Q13263 835 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 SNX1Q13596 522 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 SCARF1Q14162 830 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PFKFB3Q16875 520 aaPredicted RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 ALKBH5Q6P6C2 394 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 ARMC9Q7Z3E5 817 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.14□□□□□ -1.27
HCG18-239ENST00000454129 OXER1Q8TDS5 423 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CEP95Q96GE4 821 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 NHEJ1Q9H9Q4 299 aaPredicted RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 SGK1O00141 431 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PGRMC1O00264 195 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 ZBTB5O15062 677 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CTIFO43310 598 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 NOL3O60936 208 aaKnown RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 MOCS3O95396 460 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 OATP04181 439 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RASSF2P50749 326 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 LMNB2Q03252 620 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CUL4BQ13620 913 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RINT1Q6NUQ1 792 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RNF207Q6ZRF8 634 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RSPH3Q86UC2 560 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 FAM71BQ8TC56 605 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PPP4R1Q8TF05 950 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RUNDC3BQ96NL0 473 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PPP1R16BQ96T49 567 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 VCX3BQ9H321 246 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 EFCC1Q9HA90 598 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 STK38LQ9Y2H1 464 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 UBN2Q6ZU65 1347 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PSAPP07602 524 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PDE1BQ01064 536 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 BIRC2Q13490 618 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 SGO2Q562F6 1265 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 TCP11X2Q5H9J9 407 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CYP4F22Q6NT55 531 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RFX6Q8HWS3 928 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 MB21D2Q8IYB1 491 aaPredicted RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 SLC10A4Q96EP9 437 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 TRIM11Q96F44 468 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 NLRP4Q96MN2 994 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 RMDN3Q96TC7 470 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CALN1Q9BXU9 219 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.14□□□□□ -1.27
HCG18-239ENST00000454129 PCDHA6Q9UN73 950 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 JRKLQ9Y4A0 524 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 PCDHA8Q9Y5H6 950 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 CDHR2Q9BYE9 1310 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 TCHHQ07283 1943 aa7.14□□□□□ -1.27
HCG18-239ENST00000454129 A0A1B0GUA9 196 aa7.13□□□□□ -1.27
HCG18-239ENST00000454129 SEC31AO94979 1220 aaKnown RBP7.13□□□□□ -1.27
HCG18-239ENST00000454129 MARK3P27448 753 aa7.13□□□□□ -1.27
HCG18-239ENST00000454129 CDC27P30260 824 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms