RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 EFEMP2O95967 443 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 MSL3P1P0C860 447 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 COL6A2P12110 1019 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC6A11P48066 632 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 EPHA5P54756 1037 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SMAD3P84022 425 aaKnown RBP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 IRF9Q00978 393 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 TERF2Q15554 542 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SMAD2Q15796 467 aaKnown RBP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 FIGNQ5HY92 759 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC23A3Q6PIS1 610 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 CEP128Q6ZU80 1094 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 PTRH1Q86Y79 214 aaKnown RBP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SPPL2CQ8IUH8 684 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 PIP4K2CQ8TBX8 421 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 DLG3Q92796 817 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 YIPF4Q9BSR8 244 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SLC13A1Q9BZW2 595 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 CDH19Q9H159 772 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 IMPACTQ9P2X3 320 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 SRPK3Q9UPE1 567 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 B3GALT1Q9Y5Z6 326 aa5.04□□□□□ -1.6
HMGB1P15-201ENST00000453854 UNC13AQ9UPW8 1703 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 H7C1D1 291 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 FZD9O00144 591 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 GLI4P10075 376 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 KRT85P78386 507 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 PIN1Q13526 163 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 PPP2R5AQ15172 486 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 DDB1Q16531 1140 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 BROXQ5VW32 411 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 RASSF3Q86WH2 238 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 NLGN4XQ8N0W4 816 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 TSR2Q969E8 191 aaKnown RBP5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 CCDC120Q96HB5 630 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 AHCYL2Q96HN2 611 aaKnown RBP5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 PLCD4Q9BRC7 762 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 C19orf73Q9NVV2 129 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 DSEQ9UL01 958 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 TAF6LQ9Y6J9 622 aa5.03□□□□□ -1.6
HMGB1P15-201ENST00000453854 FITM1A5D6W6 292 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZNF503-AS2A6NEH8 195 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KRIT1O00522 736 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ABLIM3O94929 683 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 HPXP02790 462 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 NTRK1P04629 796 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KRT15P19012 456 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 MESP2Q0VG99 397 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KLF1Q13351 362 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 LRRC32Q14392 662 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KIR3DS1Q14943 382 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 LRRC41Q15345 812 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 SEC23AQ15436 765 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZNF174Q15697 407 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 CHRNA2Q15822 529 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 SLC14A2Q15849 920 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 RGL3Q3MIN7 710 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 FYB2Q5VWT5 728 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 CC2D1AQ6P1N0 951 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KCTD1Q719H9 257 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 PASD1Q8IV76 773 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 OXR1Q8N573 874 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KIAA1958Q8N8K9 716 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZNF610Q8N9Z0 462 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 NETO2Q8NC67 525 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 FLAD1Q8NFF5 587 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 USP33Q8TEY7 942 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 SHISA4Q96DD7 197 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 HOOK2Q96ED9 719 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ELF4Q99607 663 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 SMAD5Q99717 465 aaKnown RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 RTFDC1Q9BY42 306 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 SMOC1Q9H4F8 434 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 TCF7L1Q9HCS4 588 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 ACSS2Q9NR19 701 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 CTNND2Q9UQB3 1225 aa5.02□□□□□ -1.61
HMGB1P15-201ENST00000453854 TRIM75PA6NK02 468 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 KCNK3O14649 394 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 HGSO14964 777 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 MAFKO60675 156 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 RFPL1O75677 317 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 CYP17A1P05093 508 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 PRKCAP17252 672 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 SLC9A1P19634 815 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 SDHAP31040 664 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 GJA4P35212 333 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 GDNFP39905 211 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 SNX17Q15036 470 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 STEAP3Q658P3 488 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 HDGFL2Q7Z4V5 671 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 NLRX1Q86UT6 975 aa5.01□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZBTB46Q86UZ6 589 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms