RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SEMA3FQ13275 785 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 SLC35G1Q2M3R5 365 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 LMBR1Q8WVP7 490 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 ZNF689Q96CS4 500 aaPredicted RBP25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 MSLNLQ96KJ4 702 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 GPR20Q99678 358 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 USP26Q9BXU7 913 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 ALG13Q9NP73 1137 aaKnown RBP25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 ZSWIM5Q9P217 1185 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 KAT6AQ92794 2004 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 TMEM221A6NGB7 291 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 M0R296 226 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 NOP56O00567 594 aaKnown RBP25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 GNAT1P11488 350 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 NT5C2P49902 561 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 ARHGAP4P98171 946 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 TRIM67Q6ZTA4 783 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 FCHSD1Q86WN1 690 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 SAMD3Q8N6K7 520 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 EHMT1Q9H9B1 1298 aa25.22■■□□□ 1.63
TNFRSF25-208ENST00000453341 KIAA1671Q9BY89 1806 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 KLRF2D3W0D1 207 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 PTPN5P54829 565 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 MRPS9P82933 396 aaKnown RBP25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 TCF15Q12870 199 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 METTL7BQ6UX53 244 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 RUFY4Q6ZNE9 571 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 CYFIP1Q7L576 1253 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 PBXIP1Q96AQ6 731 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 ZBTB47Q9UFB7 747 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 MAD2L2Q9UI95 211 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 PLAGL2Q9UPG8 496 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 KMT2EQ8IZD2 1858 aa25.21■■□□□ 1.63
TNFRSF25-208ENST00000453341 MYO15AQ9UKN7 3530 aa25.2■■□□□ 1.63
TNFRSF25-208ENST00000453341 GCOM1H8Y6P7 765 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 ENPP3O14638 875 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 EYA4O95677 639 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 POLR2MP0CAP2 368 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 DNAJB1P25685 340 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 ICAM3P32942 547 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 MGAT3Q09327 533 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 LPIN1Q14693 890 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 INPP4AQ96PE3 977 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 CLEC1BQ9P126 229 aa25.2■■□□□ 1.62
TNFRSF25-208ENST00000453341 NDUFV1P49821 464 aa25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 BTG3Q14201 252 aaPredicted RBP25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 UTP14CQ5TAP6 766 aaKnown RBP25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 ADGRD2Q7Z7M1 963 aa25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 RILPL2Q969X0 211 aa25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 PLVAPQ9BX97 442 aa25.19■■□□□ 1.62
TNFRSF25-208ENST00000453341 FRMPD4Q14CM0 1322 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 SPATA31C2B4DYI2 1134 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 SDSP20132 328 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 MFAP1P55081 439 aaKnown RBP25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 ZXDAP98168 799 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 NEDD9Q14511 834 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 HOMER1Q86YM7 354 aa25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 ZNF215Q9UL58 517 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF25-208ENST00000453341 LOC730098B7Z3J9 87 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 DGKIO75912 1065 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 GNPTABQ3T906 1256 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 IFIT1BQ5T764 474 aaKnown RBP25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 SMRP1Q8NCR6 262 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 LINC01599Q8WXQ3 324 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 PIGSQ96S52 555 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 RTEL1Q9NZ71 1219 aa25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 MRPL42Q9Y6G3 142 aaKnown RBP25.17■■□□□ 1.62
TNFRSF25-208ENST00000453341 NRCAMQ92823 1304 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 PALM3A6NDB9 673 aaPredicted RBP25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 ST18O60284 1047 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 ITGB1P05556 798 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 PTPRZ1P23471 2315 aaPredicted RBP25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 RRP1P56182 461 aaKnown RBP25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 SP4Q02446 784 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 SEC23AQ15436 765 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 EFHBQ8N7U6 833 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 SPPL3Q8TCT6 385 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 P2RX5Q93086 422 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 UBAC1Q9BSL1 405 aa25.16■■□□□ 1.62
TNFRSF25-208ENST00000453341 GLP2RO95838 553 aa25.15■■□□□ 1.62
TNFRSF25-208ENST00000453341 CBX2Q14781 532 aaPredicted RBP25.15■■□□□ 1.62
TNFRSF25-208ENST00000453341 FBXO47Q5MNV8 452 aa25.15■■□□□ 1.62
TNFRSF25-208ENST00000453341 DMDP11532 3685 aa25.15■■□□□ 1.62
TNFRSF25-208ENST00000453341 FIBPO43427 364 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 COASYQ13057 564 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 PKN1Q16512 942 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 TAF2Q6P1X5 1199 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 CWC27Q6UX04 472 aaKnown RBP25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 SUGP1Q8IWZ8 645 aaKnown RBP25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 CRIPAKQ8N1N5 446 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 FBXL6Q8N531 539 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 PRRX2Q99811 253 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 KRT23Q9C075 422 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 RIOX1Q9H6W3 641 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 BARX2Q9UMQ3 279 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 PCDHGC5Q9Y5F6 944 aa25.14■■□□□ 1.62
TNFRSF25-208ENST00000453341 RIF1Q5UIP0 2472 aaKnown RBP25.13■■□□□ 1.61
TNFRSF25-208ENST00000453341 CYTH3O43739 400 aa25.13■■□□□ 1.61
TNFRSF25-208ENST00000453341 STAM2O75886 525 aa25.13■■□□□ 1.61
TNFRSF25-208ENST00000453341 AGO3Q9H9G7 860 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms