RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-210ENST00000453030 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
GARNL3-210ENST00000453030 MEIS2O14770 477 aa13.44□□□□□ -0.26
GARNL3-210ENST00000453030 PRC1O43663 620 aa13.44□□□□□ -0.26
GARNL3-210ENST00000453030 MARK3P27448 753 aa13.44□□□□□ -0.26
GARNL3-210ENST00000453030 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
GARNL3-210ENST00000453030 MAP4K1Q92918 833 aa13.44□□□□□ -0.26
GARNL3-210ENST00000453030 MRPL38Q96DV4 380 aaKnown RBP13.44□□□□□ -0.26
GARNL3-210ENST00000453030 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 CCDC69A6NI79 296 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-210ENST00000453030 GHRP10912 638 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 PLA2G5P39877 138 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-210ENST00000453030 UBE2SQ16763 222 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 TIGD5Q53EQ6 642 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 NLRX1Q86UT6 975 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
GARNL3-210ENST00000453030 EVPLQ92817 2033 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 APBB2Q92870 758 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 TOP1MTQ969P6 601 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 CD320Q9NPF0 282 aa13.43□□□□□ -0.26
GARNL3-210ENST00000453030 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
GARNL3-210ENST00000453030 ATP9AO75110 1047 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 IL9P15248 144 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 KCNA2P16389 499 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 ADAM17P78536 824 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 GPM6BQ13491 265 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 PTPROQ16827 1216 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 LEXMQ3ZCV2 418 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 TMEM31Q5JXX7 168 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 XRRA1Q6P2D8 792 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 GPRASP2Q96D09 838 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 SAMD11Q96NU1 681 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 LRFN3Q9BTN0 628 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 PSTPIP2Q9H939 334 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
GARNL3-210ENST00000453030 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 TRIOO75962 3097 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-210ENST00000453030 H3BQ06 376 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-210ENST00000453030 CSPG5O95196 566 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 CHRNA1P02708 482 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 ITGB5P18084 799 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 MCM5P33992 734 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 CTNNB1P35222 781 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 GNAQP50148 359 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 MTMR1Q13613 665 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 GRIK4Q16099 956 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 TCEAL5Q5H9L2 206 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 FAM26DQ5JW98 314 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-210ENST00000453030 MICU3Q86XE3 530 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 TMEM192Q8IY95 271 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-210ENST00000453030 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.41□□□□□ -0.26
GARNL3-210ENST00000453030 GLG1Q92896 1179 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 HCN4Q9Y3Q4 1203 aa13.41□□□□□ -0.26
GARNL3-210ENST00000453030 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 PLXNA4Q9HCM2 1894 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 SPDYE3A6NKU9 549 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 H3BNC9 293 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 SLC27A2O14975 620 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
GARNL3-210ENST00000453030 IGBP1P78318 339 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 MGAT3Q09327 533 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 LPIN1Q14693 890 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 TAF2Q6P1X5 1199 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 FIBCD1Q8N539 461 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 CDHR1Q96JP9 859 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
GARNL3-210ENST00000453030 C11orf16Q9NQ32 467 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 ERAP1Q9NZ08 941 aa13.4□□□□□ -0.26
GARNL3-210ENST00000453030 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 CALM1P0DP23 149 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 CALM2P0DP24 149 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 CALM3P0DP25 149 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 GJD3Q8N144 294 aa13.39□□□□□ -0.27
GARNL3-210ENST00000453030 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms