RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
HERC3-207ENST00000452979 FAM50BQ9Y247 325 aa13.48□□□□□ -0.25
HERC3-207ENST00000452979 NRCAMQ92823 1304 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 CHRNA1P02708 482 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 CTSHP09668 335 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 LINC00271P0C7V0 271 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 LTBRP36941 435 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 XRRA1Q6P2D8 792 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
HERC3-207ENST00000452979 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
HERC3-207ENST00000452979 LMAN2LQ9H0V9 348 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
HERC3-207ENST00000452979 ERICH2A1L162 156 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.25
HERC3-207ENST00000452979 DCXO43602 365 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 CYP21A2P08686 494 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 SMARCA1P28370 1054 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 BMPR1AP36894 532 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 ZP2Q05996 745 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 MGAT3Q09327 533 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 CLP1Q92989 425 aaKnown RBP13.46□□□□□ -0.25
HERC3-207ENST00000452979 MAP3K14Q99558 947 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 RC3H2Q9HBD1 1191 aaKnown RBP13.46□□□□□ -0.25
HERC3-207ENST00000452979 RWDD3Q9Y3V2 267 aa13.46□□□□□ -0.25
HERC3-207ENST00000452979 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
HERC3-207ENST00000452979 ENPP3O14638 875 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 WTAPQ15007 396 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 UTP14CQ5TAP6 766 aaKnown RBP13.45□□□□□ -0.26
HERC3-207ENST00000452979 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
HERC3-207ENST00000452979 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 TRIM50Q86XT4 487 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 ADHFE1Q8IWW8 467 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 ZNF689Q96CS4 500 aaPredicted RBP13.45□□□□□ -0.26
HERC3-207ENST00000452979 KCNH6Q9H252 994 aa13.45□□□□□ -0.26
HERC3-207ENST00000452979 TTC3P53804 2025 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 E7EWF7 191 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 MEIS2O14770 477 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 GRM6O15303 877 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 LPIN1Q14693 890 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
HERC3-207ENST00000452979 SMAD2Q15796 467 aaKnown RBP13.44□□□□□ -0.26
HERC3-207ENST00000452979 CSPP1Q1MSJ5 1256 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
HERC3-207ENST00000452979 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
HERC3-207ENST00000452979 ADGRA3Q8IWK6 1321 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 MBLAC1A4D2B0 266 aaPredicted RBP13.43□□□□□ -0.26
HERC3-207ENST00000452979 ATP9AO75110 1047 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 DGKIO75912 1065 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 KCNA2P16389 499 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 CTNNB1P35222 781 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
HERC3-207ENST00000452979 PTH1RQ03431 593 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 HYAL1Q12794 435 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 SMARCC2Q8TAQ2 1214 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 CUL5Q93034 780 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 CDHR1Q96JP9 859 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
HERC3-207ENST00000452979 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
HERC3-207ENST00000452979 C5orf42Q9H799 3197 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 RPLP2P05387 115 aaKnown RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 GHRP10912 638 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 GSPT1P15170 499 aaKnown RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 IRS1P35568 1242 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 ANTXR2P58335 489 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 DLX2Q07687 328 aaPredicted RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 CAMK1Q14012 370 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 ALYREFQ86V81 257 aaKnown RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 SEPT1Q8WYJ6 367 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 P2RX5Q93086 422 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
HERC3-207ENST00000452979 LZTS2Q9BRK4 669 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 SQORQ9Y6N5 450 aa13.42□□□□□ -0.26
HERC3-207ENST00000452979 KIAA1671Q9BY89 1806 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms