RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
CHD3-206ENST00000452447 ABHD14A-ACY1A0A1B0GW23 586 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 STXBP3O00186 592 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 TLL1O43897 1013 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 EFCAB14O75071 495 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 HOXC8P31273 242 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 ADD1P35611 737 aaKnown RBP14.74□□□□□ -0.05
CHD3-206ENST00000452447 WDR5P61964 334 aaKnown RBP14.74□□□□□ -0.05
CHD3-206ENST00000452447 SEPT1Q8WYJ6 367 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 ZBED2Q9BTP6 218 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 TELO2Q9Y4R8 837 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 TRANK1O15050 2925 aa14.74□□□□□ -0.05
CHD3-206ENST00000452447 LGR5O75473 907 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 TRAF7Q6Q0C0 670 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 GLG1Q92896 1179 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 MXRA8Q9BRK3 442 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 ANO3Q9BYT9 981 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 KCNH7Q9NS40 1196 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 ERAP1Q9NZ08 941 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 NCOR1O75376 2440 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 NRCAMQ92823 1304 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 PTPRSQ13332 1948 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 CAND2O75155 1236 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 ZNF76P36508 570 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 AKAP17AQ02040 695 aaKnown RBP14.73□□□□□ -0.05
CHD3-206ENST00000452447 AP3B2Q13367 1082 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 ADGRE1Q14246 886 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 MBTPS1Q14703 1052 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 PFKFB3Q16875 520 aaPredicted RBP14.73□□□□□ -0.05
CHD3-206ENST00000452447 PGBD1Q96JS3 809 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
CHD3-206ENST00000452447 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
CHD3-206ENST00000452447 MICAL3Q7RTP6 2002 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 GSTTP1A0A1W2PQM5 241 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 SCG2P13521 617 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 MARK3P27448 753 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 DEFB103AP81534 67 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 CEP55Q53EZ4 464 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 FBXL16Q8N461 479 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 USP38Q8NB14 1042 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 CCDC12Q8WUD4 166 aaPredicted RBP14.72□□□□□ -0.05
CHD3-206ENST00000452447 LMBR1Q8WVP7 490 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 SMARCAD1Q9H4L7 1026 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 CERS4Q9HA82 394 aa14.72□□□□□ -0.05
CHD3-206ENST00000452447 EPB41L2O43491 1005 aaKnown RBP14.71□□□□□ -0.05
CHD3-206ENST00000452447 CTSHP09668 335 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 SREBF1P36956 1147 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 PPFIA1Q13136 1202 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 CCDC85BQ15834 202 aaPredicted RBP14.71□□□□□ -0.05
CHD3-206ENST00000452447 DBF4BQ8NFT6 615 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 CYP2W1Q8TAV3 490 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 COL25A1Q9BXS0 654 aaPredicted RBP14.71□□□□□ -0.05
CHD3-206ENST00000452447 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 TMEM260Q9NX78 707 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 SLC9A2Q9UBY0 812 aa14.71□□□□□ -0.05
CHD3-206ENST00000452447 GJB5O95377 273 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 CLK2P49760 499 aaKnown RBP14.7□□□□□ -0.06
CHD3-206ENST00000452447 ADAM17P78536 824 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 TAP1Q03518 808 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 TCTN1Q2MV58 587 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 JAKMIP3Q5VZ66 844 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 TAF2Q6P1X5 1199 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 TMCO2Q7Z6W1 182 aaPredicted RBP14.7□□□□□ -0.06
CHD3-206ENST00000452447 ARNTL2Q8WYA1 636 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 SEPT8Q92599 483 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 TNPO1Q92973 898 aaKnown RBP14.7□□□□□ -0.06
CHD3-206ENST00000452447 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 C6orf50Q9HD87 102 aa14.7□□□□□ -0.06
CHD3-206ENST00000452447 MEIS1O00470 390 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 PRPF3O43395 683 aaKnown RBP14.69□□□□□ -0.06
CHD3-206ENST00000452447 GTPBP6O43824 516 aaPredicted RBP14.69□□□□□ -0.06
CHD3-206ENST00000452447 AMHP03971 560 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 ARP10275 920 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 GNA11P29992 359 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 PLEKHG4Q58EX7 1191 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 MCTP2Q6DN12 878 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 FAM117BQ6P1L5 589 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 RUFY3Q7L099 469 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 RSPH3Q86UC2 560 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 MICALL1Q8N3F8 863 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 PHKBQ93100 1093 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 RAD9AQ99638 391 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 ZMYND12Q9H0C1 365 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 NFASCO94856 1347 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 NID2Q14112 1375 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 REV3LO60673 3130 aa14.69□□□□□ -0.06
CHD3-206ENST00000452447 MYH9P35579 1960 aaKnown RBP14.69□□□□□ -0.06
CHD3-206ENST00000452447 ESYT2A0FGR8 921 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 GRIK4Q16099 956 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 MYOCDQ8IZQ8 938 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 REXO1Q8N1G1 1221 aaKnown RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 RNF26Q9BY78 433 aaPredicted RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 AGO4Q9HCK5 861 aaKnown RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 TUBE1Q9UJT0 475 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 CYP46A1Q9Y6A2 500 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 LCHNA4D1U4 455 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 RRN3P2A6NIE6 340 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms