RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.66■■□□□ 1.22
COL9A3-202ENST00000452372 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.66■■□□□ 1.22
COL9A3-202ENST00000452372 TLR3O15455 904 aaKnown RBP22.66■■□□□ 1.22
COL9A3-202ENST00000452372 MMP1P03956 469 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 ACRP10323 421 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 KRT2P35908 639 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 NBPF20Q3BBV1 942 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 VWCEQ96DN2 955 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 BRMS1Q9HCU9 246 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 CHD9Q3L8U1 2897 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 CCDC194A0A1B0GVG4 234 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 B4GALT4O60513 344 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 SETQ01105 290 aaPredicted RBP22.65■■□□□ 1.22
COL9A3-202ENST00000452372 PPIGQ13427 754 aaKnown RBP eCLIP22.65■■□□□ 1.221e-23■■■□□ 17.8
COL9A3-202ENST00000452372 NFRKBQ6P4R8 1299 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 ZNF365Q70YC5 407 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 TMEM199Q8N511 208 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 FAM184AQ8NB25 1140 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 TELO2Q9Y4R8 837 aa22.65■■□□□ 1.22
COL9A3-202ENST00000452372 CYP3A7-CYP3A51PA0A087WV96 503 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 F2P00734 622 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 ZNF286BP0CG31 522 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 CYP3A7P24462 503 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 ITGB3BPQ13352 177 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-202ENST00000452372 INF2Q27J81 1249 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 PRR16Q569H4 304 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 LENG9Q96B70 501 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 C8orf76Q96K31 380 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 SDF4Q9BRK5 362 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 C16orf70Q9BSU1 422 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 NOC4LQ9BVI4 516 aaKnown RBP22.64■■□□□ 1.21
COL9A3-202ENST00000452372 KATNAL1Q9BW62 490 aa22.64■■□□□ 1.21
COL9A3-202ENST00000452372 JPH1Q9HDC5 661 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-202ENST00000452372 GRXCR1A8MXD5 290 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 HAS3O00219 553 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 IPO5O00410 1097 aaKnown RBP22.63■■□□□ 1.21
COL9A3-202ENST00000452372 PSEN2P49810 448 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 FOSBP53539 338 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 SP4Q02446 784 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 PTPN11Q06124 597 aaPredicted RBP22.63■■□□□ 1.21
COL9A3-202ENST00000452372 NR5A1Q13285 461 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 MOXD1Q6UVY6 613 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 DIS3L2Q8IYB7 885 aaKnown RBP22.63■■□□□ 1.21
COL9A3-202ENST00000452372 MYLIPQ8WY64 445 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 SEPT1Q8WYJ6 367 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 TNFRSF25Q93038 417 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 SLC9A2Q9UBY0 812 aa22.63■■□□□ 1.21
COL9A3-202ENST00000452372 TMEM265A0A087WTH1 108 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 GSTTP1A0A1W2PQM5 241 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 BTBD18B2RXH4 712 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 DHX15O43143 795 aaKnown RBP22.62■■□□□ 1.21
COL9A3-202ENST00000452372 LGALS2P05162 132 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 MFSD10Q14728 455 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 Q4G0T1 1027 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 PIK3AP1Q6ZUJ8 805 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 MBOAT7Q96N66 472 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 ZNF577Q9BSK1 485 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 WNT8AQ9H1J5 351 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 HIPK3Q9H422 1215 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 IL23AQ9NPF7 189 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 TBC1D22BQ9NU19 505 aa22.62■■□□□ 1.21
COL9A3-202ENST00000452372 H3BRB1 525 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 DNAJB2P25686 324 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 TCF7P36402 384 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-202ENST00000452372 CHMP4BP1P59074 171 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 GUCY1B3Q02153 619 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 SAFBQ15424 915 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL9A3-202ENST00000452372 KIAA0753Q2KHM9 967 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 FAM47CQ5HY64 1035 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 EARS2Q5JPH6 523 aaKnown RBP22.61■■□□□ 1.21
COL9A3-202ENST00000452372 NEK8Q86SG6 692 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 SESTD1Q86VW0 696 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 TUT1Q9H6E5 874 aaKnown RBP22.61■■□□□ 1.21
COL9A3-202ENST00000452372 CXXC1Q9P0U4 656 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-202ENST00000452372 KIF3AQ9Y496 699 aa22.61■■□□□ 1.21
COL9A3-202ENST00000452372 MSH4O15457 936 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 TDP2O95551 362 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 PBX2P40425 430 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 CCL23P55773 120 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 GRIN2CQ14957 1233 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 UTP14CQ5TAP6 766 aaKnown RBP22.6■■□□□ 1.21
COL9A3-202ENST00000452372 PPP1R13LQ8WUF5 828 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 HERVK_113Q902F9 699 aa22.6■■□□□ 1.21
COL9A3-202ENST00000452372 TRMT13Q9NUP7 481 aaKnown RBP22.6■■□□□ 1.21
COL9A3-202ENST00000452372 VCANP13611 3396 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 ATG7O95352 703 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 SUPT20HL2P0C7V6 817 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 ACTR2P61160 394 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 LETM2Q2VYF4 491 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 PPP4R3AQ6IN85 833 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 C7orf31Q8N865 590 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 UIMC1Q96RL1 719 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 HDAC6Q9UBN7 1215 aa22.59■■□□□ 1.21
COL9A3-202ENST00000452372 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.59■■□□□ 1.21
COL9A3-202ENST00000452372 FAM205CA6NFA0 338 aa22.58■■□□□ 1.21
COL9A3-202ENST00000452372 CYP2C9P11712 490 aa22.58■■□□□ 1.21
COL9A3-202ENST00000452372 GCFC2P16383 781 aaKnown RBP22.58■■□□□ 1.21
COL9A3-202ENST00000452372 CUL4AQ13619 759 aa22.58■■□□□ 1.21
COL9A3-202ENST00000452372 PSRC1Q6PGN9 363 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms