RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 NRCAMQ92823 1304 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 MEIS2O14770 477 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 CTSHP09668 335 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 GNAQP50148 359 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 ADAM17P78536 824 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 PTPROQ16827 1216 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 TIGD5Q53EQ6 642 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 RPAINQ86UA6 219 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 TOP1MTQ969P6 601 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 GPRASP2Q96D09 838 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
USP1-204ENST00000452143 YME1L1Q96TA2 773 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 C17orf80Q9BSJ5 609 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
USP1-204ENST00000452143 UBE2ZQ9H832 354 aaPredicted RBP12.54□□□□□ -0.4
USP1-204ENST00000452143 SETD4Q9NVD3 440 aa12.54□□□□□ -0.4
USP1-204ENST00000452143 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.53□□□□□ -0.4
USP1-204ENST00000452143 ARHGAP4P98171 946 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 FAM26DQ5JW98 314 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
USP1-204ENST00000452143 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
USP1-204ENST00000452143 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
USP1-204ENST00000452143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
USP1-204ENST00000452143 PRC1O43663 620 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 RPLP2P05387 115 aaKnown RBP12.52□□□□□ -0.41
USP1-204ENST00000452143 CALM1P0DP23 149 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 CALM2P0DP24 149 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 CALM3P0DP25 149 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 MCM5P33992 734 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
USP1-204ENST00000452143 PLA2G5P39877 138 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 MYL10Q9BUA6 226 aa12.52□□□□□ -0.41
USP1-204ENST00000452143 TTC3P53804 2025 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 H3BNC9 293 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 SH2B2O14492 632 aaPredicted RBP12.51□□□□□ -0.41
USP1-204ENST00000452143 KCNA2P16389 499 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 KCNA5P22460 613 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 LIFRP42702 1097 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 SP4Q02446 784 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 MTMR1Q13613 665 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
USP1-204ENST00000452143 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
USP1-204ENST00000452143 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 ERAP1Q9NZ08 941 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 HCN4Q9Y3Q4 1203 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
USP1-204ENST00000452143 MUC6Q6W4X9 2439 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 MAFGO15525 162 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
USP1-204ENST00000452143 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 EPHX3Q9H6B9 360 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 ADGRA3Q8IWK6 1321 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
USP1-204ENST00000452143 LOXHD1Q8IVV2 1947 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 KIAA1671Q9BY89 1806 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 MBLAC1A4D2B0 266 aaPredicted RBP12.49□□□□□ -0.41
USP1-204ENST00000452143 C5orf67F2Z3F1 127 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 GPR37L1O60883 481 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 UPP2O95045 317 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 CHRNA1P02708 482 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 ITGB5P18084 799 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 MGAT3Q09327 533 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 GPM6BQ13491 265 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
USP1-204ENST00000452143 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 FAM122AQ96E09 287 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 IL17RAQ96F46 866 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms