RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 TMEM199Q8N511 208 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 MBOAT7Q96N66 472 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 RNPEPQ9H4A4 650 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 CYP3A7-CYP3A51PA0A087WV96 503 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 NOP56O00567 594 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 IQCF3P0C7M6 154 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 CYP3A7P24462 503 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 TCF7P36402 384 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 CCL23P55773 120 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 PLA2G4DQ86XP0 818 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 C7orf31Q8N865 590 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 JPH1Q9HDC5 661 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 SLC9A2Q9UBY0 812 aa18.35■□□□□ 0.53
SCAMP4-205ENST00000452128 JAK2O60674 1132 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 ACRP10323 421 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 PTK7Q13308 1070 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 HERVK_113Q902F9 699 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 TNFRSF25Q93038 417 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 SCLYQ96I15 445 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
SCAMP4-205ENST00000452128 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
SCAMP4-205ENST00000452128 CHMP4BP1P59074 171 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 ACTR2P61160 394 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 SP4Q02446 784 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 UTP14CQ5TAP6 766 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 CAGE1Q8TC20 777 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 OXER1Q8TDS5 423 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 TBCKQ8TEA7 893 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 DOCK5Q9H7D0 1870 aa18.33■□□□□ 0.52
SCAMP4-205ENST00000452128 IPO5O00410 1097 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 CKBP12277 381 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 ZNF76P36508 570 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 BFSP2Q13515 415 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 MARCH8Q5T0T0 291 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 B3GNT9Q6UX72 402 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 PLPPR4Q7Z2D5 763 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
SCAMP4-205ENST00000452128 MBLAC1A4D2B0 266 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 MSH4O15457 936 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 TREHO43280 583 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 MBTPS1Q14703 1052 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 Q4G0T1 1027 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 PRR16Q569H4 304 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 SLC5A5Q92911 643 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 SDF4Q9BRK5 362 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 SMARCAD1Q9H4L7 1026 aa18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-205ENST00000452128 NRCAMQ92823 1304 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 C17orf102A2RUQ5 167 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 CXCL10P02778 98 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 SELPP16109 830 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 ATP4AP20648 1035 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 RFC2P35250 354 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 SETQ01105 290 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 FAM109BQ6ICB4 259 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 RPUSD2Q8IZ73 545 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 LMBR1Q8WVP7 490 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 TBC1D22BQ9NU19 505 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 ERAP1Q9NZ08 941 aa18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 ZNF215Q9UL58 517 aaPredicted RBP18.3■□□□□ 0.52
SCAMP4-205ENST00000452128 NBNO60934 754 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 TDP2O95551 362 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 FGBP02675 491 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 PFKMP08237 780 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 RABEP1Q15276 862 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 TCTN1Q2MV58 587 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 KRT25Q7Z3Z0 450 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 RETREG2Q8NC44 543 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 ETNPPLQ8TBG4 499 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 WASF1Q92558 559 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 ATP6V0A1Q93050 837 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 UIMC1Q96RL1 719 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 RIT2Q99578 217 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 ZNF577Q9BSK1 485 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 TRIP12Q14669 1992 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
SCAMP4-205ENST00000452128 CHD9Q3L8U1 2897 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 PSMD10O75832 226 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms