RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SETD4Q9NVD3 440 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 DAXXQ9UER7 740 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-208ENST00000451893 SMCO2A6NFE2 343 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 MAFGO15525 162 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 LGR5O75473 907 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 CXCL10P02778 98 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 CTSHP09668 335 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 RCAN1P53805 252 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 APOBRQ0VD83 1088 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 SEPT1Q8WYJ6 367 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 BRF1Q92994 677 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 WNT8BQ93098 351 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 KIF2CQ99661 725 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 JADE2Q9NQC1 790 aa24.7■■□□□ 1.54
C9orf3-208ENST00000451893 CPA1P15085 419 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 ITGB5P18084 799 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 MARK3P27448 753 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 TRIM71Q2Q1W2 868 aaKnown RBP24.69■■□□□ 1.54
C9orf3-208ENST00000451893 CCDC12Q8WUD4 166 aaPredicted RBP24.69■■□□□ 1.54
C9orf3-208ENST00000451893 ARNTL2Q8WYA1 636 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 SNX21Q969T3 373 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 PGBD1Q96JS3 809 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 ANO3Q9BYT9 981 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 AZI2Q9H6S1 392 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 ERAP1Q9NZ08 941 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 UBIAD1Q9Y5Z9 338 aa24.69■■□□□ 1.54
C9orf3-208ENST00000451893 NRCAMQ92823 1304 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 ATP9AO75110 1047 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 AMHP03971 560 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 KCNA2P16389 499 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 HIC1Q14526 733 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 SKIV2LQ15477 1246 aaKnown RBP24.68■■□□□ 1.54
C9orf3-208ENST00000451893 FAM117BQ6P1L5 589 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 USP38Q8NB14 1042 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 SYMPKQ92797 1274 aaKnown RBP24.68■■□□□ 1.54
C9orf3-208ENST00000451893 COL25A1Q9BXS0 654 aaPredicted RBP24.68■■□□□ 1.54
C9orf3-208ENST00000451893 JPH1Q9HDC5 661 aaPredicted RBP24.68■■□□□ 1.54
C9orf3-208ENST00000451893 BARHL2Q9NY43 387 aa24.68■■□□□ 1.54
C9orf3-208ENST00000451893 STXBP3O00186 592 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 CAND2O75155 1236 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 CDC27P30260 824 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 DEFB103AP81534 67 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 PPFIA1Q13136 1202 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 AP3B2Q13367 1082 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 ADGRE1Q14246 886 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 RSPH3Q86UC2 560 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 TEX2Q8IWB9 1127 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 SEPT8Q92599 483 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 KCNB2Q92953 911 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 TNPO1Q92973 898 aaKnown RBP24.67■■□□□ 1.54
C9orf3-208ENST00000451893 MXRA8Q9BRK3 442 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 SMARCAD1Q9H4L7 1026 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 SNX14Q9Y5W7 946 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 CDH23Q9H251 3354 aa24.67■■□□□ 1.54
C9orf3-208ENST00000451893 MYOCDQ8IZQ8 938 aa24.66■■□□□ 1.54
C9orf3-208ENST00000451893 LMBR1Q8WVP7 490 aa24.66■■□□□ 1.54
C9orf3-208ENST00000451893 THEGQ9P2T0 379 aa24.66■■□□□ 1.54
C9orf3-208ENST00000451893 SLC9A2Q9UBY0 812 aa24.66■■□□□ 1.54
C9orf3-208ENST00000451893 PTPRSQ13332 1948 aa24.66■■□□□ 1.54
C9orf3-208ENST00000451893 SCG2P13521 617 aa24.65■■□□□ 1.54
C9orf3-208ENST00000451893 ADD1P35611 737 aaKnown RBP24.65■■□□□ 1.54
C9orf3-208ENST00000451893 GPNMBQ14956 572 aa24.65■■□□□ 1.54
C9orf3-208ENST00000451893 TMCO2Q7Z6W1 182 aaPredicted RBP24.65■■□□□ 1.54
C9orf3-208ENST00000451893 DBF4BQ8NFT6 615 aa24.65■■□□□ 1.54
C9orf3-208ENST00000451893 C6orf50Q9HD87 102 aa24.65■■□□□ 1.54
C9orf3-208ENST00000451893 TCEAL9Q9UHQ7 104 aa24.65■■□□□ 1.54
C9orf3-208ENST00000451893 MICAL3Q7RTP6 2002 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 RPS6KB1P23443 525 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 IGBP1P78318 339 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TAP1Q03518 808 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 PFKFB3Q16875 520 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-208ENST00000451893 JAKMIP3Q5VZ66 844 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TYW1BQ6NUM6 668 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TAF2Q6P1X5 1199 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 RAD9AQ99638 391 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 KCNH7Q9NS40 1196 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TMEM260Q9NX78 707 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TRPC6Q9Y210 931 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 TELO2Q9Y4R8 837 aa24.64■■□□□ 1.54
C9orf3-208ENST00000451893 RFXAPO00287 272 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 GJB5O95377 273 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 HOXC8P31273 242 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 FUT2Q10981 343 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 MBTPS1Q14703 1052 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 GRIK4Q16099 956 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 CEP55Q53EZ4 464 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 TRAF7Q6Q0C0 670 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 TUBE1Q9UJT0 475 aa24.63■■□□□ 1.53
C9orf3-208ENST00000451893 GSTTP1A0A1W2PQM5 241 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 GNA11P29992 359 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 TJAP1Q5JTD0 557 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 MCTP2Q6DN12 878 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 PRDM6Q9NQX0 595 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 MTUS1Q9ULD2 1270 aa24.62■■□□□ 1.53
C9orf3-208ENST00000451893 DDX39AO00148 427 aaKnown RBP24.61■■□□□ 1.53
C9orf3-208ENST00000451893 ST18O60284 1047 aa24.61■■□□□ 1.53
C9orf3-208ENST00000451893 PLEKHG4Q58EX7 1191 aa24.61■■□□□ 1.53
C9orf3-208ENST00000451893 CCDC148Q8NFR7 591 aa24.61■■□□□ 1.53
C9orf3-208ENST00000451893 APBB2Q92870 758 aa24.61■■□□□ 1.53
C9orf3-208ENST00000451893 TM6SF1Q9BZW5 370 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms