RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 SREBF1P36956 1147 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 KCNJ6P48051 423 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 IKBKEQ14164 716 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 GRIN2CQ14957 1233 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 ZNF274Q96GC6 653 aaPredicted RBP18.31■□□□□ 0.52
SGCE-208ENST00000450385 ZFP91Q96JP5 570 aaPredicted RBP18.31■□□□□ 0.52
SGCE-208ENST00000450385 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 KCNH7Q9NS40 1196 aa18.31■□□□□ 0.52
SGCE-208ENST00000450385 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
SGCE-208ENST00000450385 GRXCR1A8MXD5 290 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 RSPH10B2B2RC85 870 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 MEIS1O00470 390 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 ATP9AO75110 1047 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 CYP3A4P08684 503 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 RSPH10BP0C881 870 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
SGCE-208ENST00000450385 PBX2P40425 430 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 SLC26A2P50443 739 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 ADAM17P78536 824 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 TAF2Q6P1X5 1199 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 CCDC148Q8NFR7 591 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 MAFAQ8NHW3 353 aaPredicted RBP18.3■□□□□ 0.52
SGCE-208ENST00000450385 MYLIPQ8WY64 445 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 SDF4Q9BRK5 362 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 SH3GLB2Q9NR46 395 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 CHD7Q9P2D1 2997 aa18.3■□□□□ 0.52
SGCE-208ENST00000450385 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 PDIA3P30101 505 aaKnown RBP18.29■□□□□ 0.52
SGCE-208ENST00000450385 GPNMBQ14956 572 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 TYW1BQ6NUM6 668 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 ANO3Q9BYT9 981 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 JPH1Q9HDC5 661 aaPredicted RBP18.29■□□□□ 0.52
SGCE-208ENST00000450385 SLC9A2Q9UBY0 812 aa18.29■□□□□ 0.52
SGCE-208ENST00000450385 TRANK1O15050 2925 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 NBNO60934 754 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 LGR5O75473 907 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 THPOP40225 353 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 NTRK3Q16288 839 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 FAM26DQ5JW98 314 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
SGCE-208ENST00000450385 TRAF7Q6Q0C0 670 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 RSPH3Q86UC2 560 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 HERC6Q8IVU3 1022 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 TRIM22Q8IYM9 498 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 C22orf23Q9BZE7 217 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 AZI2Q9H6S1 392 aa18.28■□□□□ 0.52
SGCE-208ENST00000450385 TREHO43280 583 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 SORBS3O60504 671 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 ATG7O95352 703 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 CPA1P15085 419 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 POU3F3P20264 500 aaPredicted RBP18.27■□□□□ 0.52
SGCE-208ENST00000450385 ZNF76P36508 570 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 ANAPC15P60006 121 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 WDR5P61964 334 aaKnown RBP18.27■□□□□ 0.52
SGCE-208ENST00000450385 ARHGAP4P98171 946 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.52
SGCE-208ENST00000450385 PKN1Q16512 942 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
SGCE-208ENST00000450385 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.52
SGCE-208ENST00000450385 CRYGNQ8WXF5 182 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 APBB2Q92870 758 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 GLG1Q92896 1179 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 NKX2-4Q9H2Z4 354 aa18.27■□□□□ 0.52
SGCE-208ENST00000450385 MBLAC1A4D2B0 266 aaPredicted RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 HIC1Q14526 733 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 PLEKHG4Q58EX7 1191 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
SGCE-208ENST00000450385 RAD9AQ99638 391 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 AGO4Q9HCK5 861 aaKnown RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 TBC1D22BQ9NU19 505 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 SETD4Q9NVD3 440 aa18.26■□□□□ 0.51
SGCE-208ENST00000450385 YBX2Q9Y2T7 364 aaKnown RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 MYH9P35579 1960 aaKnown RBP18.26■□□□□ 0.51
SGCE-208ENST00000450385 USP11P51784 963 aa18.25■□□□□ 0.51
SGCE-208ENST00000450385 LMBR1Q8WVP7 490 aa18.25■□□□□ 0.51
SGCE-208ENST00000450385 SEPT8Q92599 483 aa18.25■□□□□ 0.51
SGCE-208ENST00000450385 SQORQ9Y6N5 450 aa18.25■□□□□ 0.51
SGCE-208ENST00000450385 MICAL3Q7RTP6 2002 aa18.25■□□□□ 0.51
SGCE-208ENST00000450385 CPLX1O14810 134 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 TLL1O43897 1013 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 CIITAP33076 1130 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 RABGGTBP53611 331 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 ACTR2P61160 394 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 SP4Q02446 784 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
SGCE-208ENST00000450385 PPFIA1Q13136 1202 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
SGCE-208ENST00000450385 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 NME8Q8N427 588 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 CYP2W1Q8TAV3 490 aa18.24■□□□□ 0.51
SGCE-208ENST00000450385 WNT8BQ93098 351 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms