RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TPM3P06753 285 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 FCER1AP12319 257 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 IDEP14735 1019 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 CTTNQ14247 550 aaKnown RBP15.89■□□□□ 0.13
USP39-207ENST00000450066 ARSHQ5FYA8 562 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 CDKAL1Q5VV42 579 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 GTF3C2Q8WUA4 911 aaPredicted RBP15.89■□□□□ 0.13
USP39-207ENST00000450066 PKD2L1Q9P0L9 805 aa15.89■□□□□ 0.13
USP39-207ENST00000450066 ERCC3P19447 782 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 CDK11BP21127 795 aaKnown RBP15.88■□□□□ 0.13
USP39-207ENST00000450066 UBASH3AP57075 661 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 MIER3Q7Z3K6 550 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 CDHR1Q96JP9 859 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 NACC1Q96RE7 527 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 PANK4Q9NVE7 773 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 DDX39AO00148 427 aaKnown RBP15.88■□□□□ 0.13
USP39-207ENST00000450066 ATP9AO75110 1047 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 RGS20O76081 388 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
USP39-207ENST00000450066 CCDC65Q8IXS2 484 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 BHMT2Q9H2M3 363 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 SLC39A2Q9NP94 309 aa15.88■□□□□ 0.13
USP39-207ENST00000450066 LCTP09848 1927 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 FRMD3A2A2Y4 597 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 P4HBP07237 508 aaKnown RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 ZBTB48P10074 688 aaPredicted RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 KRT76Q01546 638 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 CNTN2Q02246 1040 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 COASYQ13057 564 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 Q3C1V9 767 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 GNPTABQ3T906 1256 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 ZSCAN30Q86W11 494 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 HPS3Q969F9 1004 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 LXNQ9BS40 222 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 CCL15-CCL14A0A0B4J2E2 113 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 BICDL2A1A5D9 508 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 ESPNB1AK53 854 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
USP39-207ENST00000450066 SFNP31947 248 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 JAK3P52333 1124 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 STXBP2Q15833 593 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 CCL15Q16663 113 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 MROH8Q9H579 483 aa15.87■□□□□ 0.13
USP39-207ENST00000450066 ASTN1O14525 1302 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 NPHP3-ACAD11A0A0J9YXS1 232 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 PDHXO00330 501 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 CCNE1P24864 410 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 ALDH5A1P51649 535 aaPredicted RBP15.86■□□□□ 0.13
USP39-207ENST00000450066 GIT2Q14161 759 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 SPRYD7Q5W111 196 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 CST9Q5W186 159 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 ANKRD23Q86SG2 305 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
USP39-207ENST00000450066 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 PIGOQ8TEQ8 1089 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 P2RX5Q93086 422 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 SENP7Q9BQF6 1050 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 ZSWIM4Q9H7M6 989 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
USP39-207ENST00000450066 TCEAL9Q9UHQ7 104 aa15.86■□□□□ 0.13
USP39-207ENST00000450066 WDR64B1ANS9 1081 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 SPATA31C2B4DYI2 1134 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 BTBD19C9JJ37 291 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 COBLO75128 1261 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 CYP2C8P10632 490 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 KCNA2P16389 499 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 PMS1P54277 932 aaKnown RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 ERVK-24P63145 666 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 FAM26FQ5R3K3 315 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 ZNF746Q6NUN9 644 aaPredicted RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 TTI2Q6NXR4 508 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 BANK1Q8NDB2 785 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 SHCBP1Q8NEM2 672 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 RDM1Q8NG50 284 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 CTAGE1Q96RT6 745 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 IMPACTQ9P2X3 320 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 NRBP1Q9UHY1 535 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 ZKSCAN5Q9Y2L8 839 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 NFASCO94856 1347 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 TRIM49BA6NDI0 452 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 LYPLA2O95372 231 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 CCNE2O96020 404 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 EDNRBP24530 442 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 SPAG1Q07617 926 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 HERC4Q5GLZ8 1057 aaPredicted RBP15.85■□□□□ 0.13
USP39-207ENST00000450066 CENPPQ6IPU0 288 aa15.85■□□□□ 0.13
USP39-207ENST00000450066 RINT1Q6NUQ1 792 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms