RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 RSPH10B2B2RC85 870 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 PRPF3O43395 683 aaKnown RBP17.44■□□□□ 0.38
CHD3-205ENST00000449744 CXCL10P02778 98 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 RSPH10BP0C881 870 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 MYOGP15173 224 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 HOXC8P31273 242 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 ARHGAP4P98171 946 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 GLG1Q92896 1179 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 SDF4Q9BRK5 362 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 JPH1Q9HDC5 661 aaPredicted RBP17.44■□□□□ 0.38
CHD3-205ENST00000449744 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 ABHD14A-ACY1A0A1B0GW23 586 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 GSTTP1A0A1W2PQM5 241 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 EFCAB14O75071 495 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 CAND2O75155 1236 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 SREBF1P36956 1147 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 CLK2P49760 499 aaKnown RBP17.43■□□□□ 0.38
CHD3-205ENST00000449744 CCT2P78371 535 aaKnown RBP17.43■□□□□ 0.38
CHD3-205ENST00000449744 IKBKEQ14164 716 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 CEP55Q53EZ4 464 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 TRAF7Q6Q0C0 670 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 HERC6Q8IVU3 1022 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 PHKBQ93100 1093 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 ERAP1Q9NZ08 941 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 SLC9A2Q9UBY0 812 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
CHD3-205ENST00000449744 LGR5O75473 907 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 CA3P07451 260 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 ARP10275 920 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 IGFBP4P22692 258 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 MARK3P27448 753 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 GNA11P29992 359 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 PDIA3P30101 505 aaKnown RBP17.42■□□□□ 0.38
CHD3-205ENST00000449744 WDR5P61964 334 aaKnown RBP17.42■□□□□ 0.38
CHD3-205ENST00000449744 CYP2W1Q8TAV3 490 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 ZBED2Q9BTP6 218 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
CHD3-205ENST00000449744 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 TET1Q8NFU7 2136 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 LAMA2P24043 3122 aaKnown RBP17.42■□□□□ 0.38
CHD3-205ENST00000449744 NFASCO94856 1347 aa17.42■□□□□ 0.38
CHD3-205ENST00000449744 TLL1O43897 1013 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 CTSHP09668 335 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 IFNAR1P17181 557 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 EVCP57679 992 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 PPFIA1Q13136 1202 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 MBTPS1Q14703 1052 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 PKN1Q16512 942 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 REXO1Q8N1G1 1221 aaKnown RBP17.41■□□□□ 0.38
CHD3-205ENST00000449744 CCDC148Q8NFR7 591 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 LMBR1Q8WVP7 490 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
CHD3-205ENST00000449744 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
CHD3-205ENST00000449744 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
CHD3-205ENST00000449744 MEIS1O00470 390 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 PPFIA3O75145 1194 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 TOB2Q14106 344 aaPredicted RBP17.4■□□□□ 0.38
CHD3-205ENST00000449744 NTRK3Q16288 839 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 NIPA1Q7RTP0 329 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 TRIM22Q8IYM9 498 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 DBF4BQ8NFT6 615 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
CHD3-205ENST00000449744 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
CHD3-205ENST00000449744 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
CHD3-205ENST00000449744 CPLX1O14810 134 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
CHD3-205ENST00000449744 ACTR2P61160 394 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 ADAM17P78536 824 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 DEFB103AP81534 67 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 GRIK4Q16099 956 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 TCTN1Q2MV58 587 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 TAF2Q6P1X5 1199 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 CPLX2Q6PUV4 134 aaKnown RBP17.39■□□□□ 0.37
CHD3-205ENST00000449744 RSPH3Q86UC2 560 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 SEPT8Q92599 483 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
CHD3-205ENST00000449744 RRN3P2A6NIE6 340 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
CHD3-205ENST00000449744 AMHP03971 560 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 CYP3A4P08684 503 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 STAT5BP51692 787 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 IGBP1P78318 339 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 SSRP1Q08945 709 aaKnown RBP17.38■□□□□ 0.37
CHD3-205ENST00000449744 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
CHD3-205ENST00000449744 ADGRE1Q14246 886 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 PLEKHG4Q58EX7 1191 aa17.38■□□□□ 0.37
CHD3-205ENST00000449744 TMCO2Q7Z6W1 182 aaPredicted RBP17.38■□□□□ 0.37
CHD3-205ENST00000449744 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
CHD3-205ENST00000449744 CERS4Q9HA82 394 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms