RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 AZI2Q9H6S1 392 aa17.69■□□□□ 0.42
LIMS1-210ENST00000449684 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
LIMS1-210ENST00000449684 JPH1Q9HDC5 661 aaPredicted RBP17.69■□□□□ 0.42
LIMS1-210ENST00000449684 SETD4Q9NVD3 440 aa17.69■□□□□ 0.42
LIMS1-210ENST00000449684 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
LIMS1-210ENST00000449684 MARK3P27448 753 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 CLK2P49760 499 aaKnown RBP17.68■□□□□ 0.42
LIMS1-210ENST00000449684 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 RBL2Q08999 1139 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 SCN5AQ14524 2016 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 NTRK3Q16288 839 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 PKN1Q16512 942 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 ZNF618Q5T7W0 954 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 MYLIPQ8WY64 445 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 SMARCAD1Q9H4L7 1026 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
LIMS1-210ENST00000449684 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 TREHO43280 583 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 BAIAP3O94812 1187 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 ARP10275 920 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 FOSL2P15408 326 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 RABGGTBP53611 331 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 NLRP5P59047 1200 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 SERINC5Q86VE9 423 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
LIMS1-210ENST00000449684 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
LIMS1-210ENST00000449684 GSTTP1A0A1W2PQM5 241 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 MEIS1O00470 390 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 ANAPC15P60006 121 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 HIC1Q14526 733 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 PHOSPHO2Q8TCD6 241 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 VWCEQ96DN2 955 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
LIMS1-210ENST00000449684 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 AGO4Q9HCK5 861 aaKnown RBP17.66■□□□□ 0.42
LIMS1-210ENST00000449684 SH3GLB2Q9NR46 395 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 TANC1Q9C0D5 1861 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 NFASCO94856 1347 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
LIMS1-210ENST00000449684 CDKL5O76039 1030 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 DEXIO95424 95 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 PPFIA1Q13136 1202 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 IKBKEQ14164 716 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
LIMS1-210ENST00000449684 WNT8BQ93098 351 aa17.65■□□□□ 0.42
LIMS1-210ENST00000449684 GAS2L1Q99501 681 aaPredicted RBP17.65■□□□□ 0.42
LIMS1-210ENST00000449684 DDX39AO00148 427 aaKnown RBP17.64■□□□□ 0.41
LIMS1-210ENST00000449684 NBNO60934 754 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 EFCAB14O75071 495 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 CYP3A4P08684 503 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 CTSHP09668 335 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 ACTR2P61160 394 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 IGBP1P78318 339 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 PPP2R2DQ66LE6 453 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 RSPH3Q86UC2 560 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 RASGRP4Q8TDF6 673 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 LMBR1Q8WVP7 490 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 TRPC6Q9Y210 931 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 KAT6AQ92794 2004 aa17.64■□□□□ 0.41
LIMS1-210ENST00000449684 FAM86B1E9PN63 330 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 BACH1O14867 736 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 CAND2O75155 1236 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 LGR5O75473 907 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 CXCL10P02778 98 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 FAM86B2P0C5J1 330 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 HOXC8P31273 242 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 STAT5BP51692 787 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
LIMS1-210ENST00000449684 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
LIMS1-210ENST00000449684 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
LIMS1-210ENST00000449684 YBX2Q9Y2T7 364 aaKnown RBP17.63■□□□□ 0.41
LIMS1-210ENST00000449684 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
LIMS1-210ENST00000449684 MYOGP15173 224 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 XBP1P17861 261 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 GRIK4Q16099 956 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 PRR16Q569H4 304 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 TAF2Q6P1X5 1199 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 HERC6Q8IVU3 1022 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 MAFAQ8NHW3 353 aaPredicted RBP17.62■□□□□ 0.41
LIMS1-210ENST00000449684 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 C22orf23Q9BZE7 217 aa17.62■□□□□ 0.41
LIMS1-210ENST00000449684 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms