RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
USP39-206ENST00000448971 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
USP39-206ENST00000448971 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
USP39-206ENST00000448971 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 RFXAPO00287 272 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 NOP56O00567 594 aaKnown RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 KPNA6O60684 536 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 TGFB3P10600 412 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 ICAM3P32942 547 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 CLK2P49760 499 aaKnown RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 TFF2Q03403 129 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 MTMR1Q13613 665 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 ME3Q16798 604 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 EMID1Q96A84 441 aaPredicted RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 GPRASP2Q96D09 838 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 CDHR1Q96JP9 859 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 NECAB3Q96P71 396 aaPredicted RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 MTCH2Q9Y6C9 303 aa16.62■□□□□ 0.25
USP39-206ENST00000448971 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
USP39-206ENST00000448971 CA3P07451 260 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 SP4Q02446 784 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 NEDD9Q14511 834 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 DGKDQ16760 1214 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 FAM47CQ5HY64 1035 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
USP39-206ENST00000448971 MCTP2Q6DN12 878 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 POTEHQ6S545 545 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 RASGRP4Q8TDF6 673 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 TSPYL2Q9H2G4 693 aaPredicted RBP16.61■□□□□ 0.25
USP39-206ENST00000448971 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
USP39-206ENST00000448971 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 SPATA31C2B4DYI2 1134 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 XBP1P17861 261 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 ITGB5P18084 799 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 ZNF76P36508 570 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 SREBF1P36956 1147 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 ARHGAP4P98171 946 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 SP2Q02086 613 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 SEMA3FQ13275 785 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 PHOSPHO2Q8TCD6 241 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 AIFM3Q96NN9 605 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
USP39-206ENST00000448971 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 DTNBO60941 627 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 RFC2P35250 354 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 KCNQ1P51787 676 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 RABEP1Q15276 862 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 CYFIP1Q7L576 1253 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 WASF1Q92558 559 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 KIF2CQ99661 725 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
USP39-206ENST00000448971 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
USP39-206ENST00000448971 ST18O60284 1047 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 CTDNEP1O95476 244 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 TAP1Q03518 808 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 KRT40Q6A162 431 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 GIMAP8Q8ND71 665 aaPredicted RBP16.58■□□□□ 0.24
USP39-206ENST00000448971 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 SENP7Q9BQF6 1050 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 MXRA8Q9BRK3 442 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 CERS4Q9HA82 394 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
USP39-206ENST00000448971 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 ACTN1P12814 892 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
USP39-206ENST00000448971 GPNMBQ14956 572 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 AAK1Q2M2I8 961 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 CEP55Q53EZ4 464 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
USP39-206ENST00000448971 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
USP39-206ENST00000448971 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 KCNJ14Q9UNX9 436 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
USP39-206ENST00000448971 TLL1O43897 1013 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 F2P00734 622 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 LGALS2P05162 132 aa16.56■□□□□ 0.24
USP39-206ENST00000448971 KCNA2P16389 499 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms