RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CDC25AP30304 524 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 KRT85P78386 507 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 FSCN1Q16658 493 aaKnown RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 DTHD1Q6ZMT9 781 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 Q9Y3F1 56 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 A6NJR5 290 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 MSCO60682 206 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 YEATS4O95619 227 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 BMP15O95972 392 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 ZNF286BP0CG31 522 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 PRPHP41219 470 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 KRT76Q01546 638 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 LRRC41Q15345 812 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 UTP14CQ5TAP6 766 aaKnown RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
RCL1-208ENST00000448872 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 KLHDC9Q8NEP7 349 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 PPP1R13LQ8WUF5 828 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 PCYT2Q99447 389 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 DISC1Q9NRI5 854 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
RCL1-208ENST00000448872 ELP1O95163 1332 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 SGPL1O95470 568 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 GJB1P08034 283 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 MYL3P08590 195 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
RCL1-208ENST00000448872 NKX3-2P78367 333 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 KCNA10Q16322 511 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 UGCGQ16739 394 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
RCL1-208ENST00000448872 MIER3Q7Z3K6 550 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 SPATA32Q96LK8 384 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 CSRNP2Q9H175 543 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
RCL1-208ENST00000448872 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
RCL1-208ENST00000448872 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
RCL1-208ENST00000448872 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 ATG7O95352 703 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 HOXD8P13378 290 aaPredicted RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 ME1P48163 572 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 GJA8P48165 433 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 CPT1AP50416 773 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 TMEM266Q2M3C6 531 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 SWSAP1Q6NVH7 229 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 CXCL17Q6UXB2 119 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 CCDC60Q8IWA6 550 aaPredicted RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
RCL1-208ENST00000448872 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 PCDHA7Q9UN72 937 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 PCDHA10Q9Y5I2 948 aa13.34□□□□□ -0.27
RCL1-208ENST00000448872 A0A087WWV3 80 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 BACH1O14867 736 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 PPP6R2O75170 966 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 LGALS2P05162 132 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 ASGR1P07306 291 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 MARK3P27448 753 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 JAK3P52333 1124 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 PSMC6P62333 389 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 CTTNQ14247 550 aaKnown RBP13.33□□□□□ -0.28
RCL1-208ENST00000448872 DGKDQ16760 1214 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
RCL1-208ENST00000448872 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
RCL1-208ENST00000448872 RNF180Q86T96 592 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 DIS3LQ8TF46 1054 aaKnown RBP13.33□□□□□ -0.28
RCL1-208ENST00000448872 KAT2BQ92831 832 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
RCL1-208ENST00000448872 ABHD8Q96I13 439 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms