RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FRMPD4Q14CM0 1322 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SORBS3O60504 671 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 AMHP03971 560 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 LGALS2P05162 132 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 HOXC8P31273 242 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 MRPS9P82933 396 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 STK3Q13188 491 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 HIC1Q14526 733 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 MBTPS1Q14703 1052 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 APOA5Q6Q788 366 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 TMCO2Q7Z6W1 182 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SGMS1Q86VZ5 419 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 RRP36Q96EU6 259 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
PDLIM2-213ENST00000448520 BDP1A6H8Y1 2624 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 LINC01553A4QN01 128 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 PIK3CDO00329 1044 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 ST18O60284 1047 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 DDAH1O94760 285 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 KCNQ1P51787 676 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 ST3GAL1Q11201 340 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 ME3Q16798 604 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 TCTN1Q2MV58 587 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 CYFIP1Q7L576 1253 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 FBXL16Q8N461 479 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 NECAB1Q8N987 351 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 SEPT8Q92599 483 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 C1QTNF1Q9BXJ1 281 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 NCOA5Q9HCD5 579 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 RTEL1Q9NZ71 1219 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 SEC63Q9UGP8 760 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 ZNF215Q9UL58 517 aaPredicted RBP15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 SLC12A7Q9Y666 1083 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 MICAL3Q7RTP6 2002 aa15.75■□□□□ 0.11
PDLIM2-213ENST00000448520 REV3LO60673 3130 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 TREHO43280 583 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 PDIA3P30101 505 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 CCT2P78371 535 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 HTRA4P83105 476 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 MYOCDQ8IZQ8 938 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 PIBF1Q8WXW3 757 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 GPR20Q99678 358 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 BCAS3Q9H6U6 928 aa15.74■□□□□ 0.11
PDLIM2-213ENST00000448520 ZBTB43O43298 467 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 EVCP57679 992 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 SEMA3FQ13275 785 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 ANKRD1Q15327 319 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 USP17L6PQ6QN14 398 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 GDPD5Q8WTR4 605 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 APBB2Q92870 758 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 TOP1MTQ969P6 601 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 NECAB3Q96P71 396 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 SETD4Q9NVD3 440 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 LIMCH1Q9UPQ0 1083 aa15.73■□□□□ 0.11
PDLIM2-213ENST00000448520 NRCAMQ92823 1304 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 MEIS2O14770 477 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 MAFGO15525 162 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 PPFIA3O75145 1194 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 CALM1P0DP23 149 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 CALM2P0DP24 149 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 CALM3P0DP25 149 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 CDC27P30260 824 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 ADAM17P78536 824 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 FAM26DQ5JW98 314 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 FBXO22Q8NEZ5 403 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 PSTPIP2Q9H939 334 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 FAM217BQ9NTX9 383 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 XIRP2A4UGR9 3374 aa15.72■□□□□ 0.11
PDLIM2-213ENST00000448520 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 SCRN1Q12765 414 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 PTPROQ16827 1216 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 UTP14CQ5TAP6 766 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 SYNE3Q6ZMZ3 975 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 RPAINQ86UA6 219 aa15.71■□□□□ 0.11
PDLIM2-213ENST00000448520 SNX21Q969T3 373 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms