RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 Q7L0L9 218 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 OTOP2Q7RTS6 562 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 DEFB128Q7Z7B8 93 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 CAGE1Q8TC20 777 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 AFAP1L1Q8TED9 768 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 WNT8BQ93098 351 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 UIMC1Q96RL1 719 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 SDF4Q9BRK5 362 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 JPH1Q9HDC5 661 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 SETD4Q9NVD3 440 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 CXXC1Q9P0U4 656 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 ZNF215Q9UL58 517 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 PCDHA4Q9UN74 947 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 C17orf102A2RUQ5 167 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 TREHO43280 583 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 LARGE1O95461 756 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 CKBP12277 381 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 SELPP16109 830 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 RFC2P35250 354 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 RBL2Q08999 1139 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 GPNMBQ14956 572 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 NPY5RQ15761 445 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 TRIM71Q2Q1W2 868 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 FAM109BQ6ICB4 259 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 BLIDQ8IZY5 108 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 CCDC155Q8N6L0 562 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 ATP6V0A1Q93050 837 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 PCYT2Q99447 389 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
PRPF40A-203ENST00000448428 STK36Q9NRP7 1315 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 GRXCR1A8MXD5 290 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 M0R2N6 131 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 DDX39AO00148 427 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 DHX15O43143 795 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 LGR5O75473 907 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 ATG7O95352 703 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 PFKMP08237 780 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 FDPSP14324 419 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 CIITAP33076 1130 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 USP11P51784 963 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 ACTR2P61160 394 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 ADAM17P78536 824 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 ZNF618Q5T7W0 954 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 LRRC8DQ7L1W4 858 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 FAM177A1Q8N128 213 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 DAGLBQ8NCG7 672 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 GLG1Q92896 1179 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 KIF2CQ99661 725 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 KCNJ14Q9UNX9 436 aa14.49□□□□□ -0.09
PRPF40A-203ENST00000448428 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 GBF1Q92538 1859 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 IPO5O00410 1097 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 CCNE2O96020 404 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 GNAT1P11488 350 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 MARK3P27448 753 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 PRR16Q569H4 304 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 GALNT17Q6IS24 598 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 TRAF7Q6Q0C0 670 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 TBCKQ8TEA7 893 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 LMBR1Q8WVP7 490 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 GTF3C6Q969F1 213 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 LENG9Q96B70 501 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 ZNF577Q9BSK1 485 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 PHF20Q9BVI0 1012 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 FTOQ9C0B1 505 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 MTMR10Q9NXD2 777 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 ORC3Q9UBD5 711 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 WDR81Q562E7 1941 aa14.48□□□□□ -0.09
PRPF40A-203ENST00000448428 MYH9P35579 1960 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 EMSYQ7Z589 1322 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 RBAK-RBAKDNI3L0D1 243 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 NBNO60934 754 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 THPOP40225 353 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 SETQ01105 290 aaPredicted RBP14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 FAM161BQ96MY7 647 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 C22orf23Q9BZE7 217 aa14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 MTIF3Q9H2K0 278 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-203ENST00000448428 IGKV6D-21A0A0A0MT36 114 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 PARNO95453 639 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 PBX2P40425 430 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 STAT5BP51692 787 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 ST3GAL1Q11201 340 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 MBTPS1Q14703 1052 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 PLPPR4Q7Z2D5 763 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 SEMA6BQ9H3T3 888 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 AZI2Q9H6S1 392 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 TBC1D22BQ9NU19 505 aa14.46□□□□□ -0.09
PRPF40A-203ENST00000448428 LIMCH1Q9UPQ0 1083 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms