RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 FGFR1OPO95684 399 aaKnown RBP22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TSPY3P0CV98 308 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TSPY8P0CW00 308 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 WLSQ5T9L3 541 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 LRIG3Q6UXM1 1119 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 DGKHQ86XP1 1220 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 CACNA2D3Q8IZS8 1091 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 C1orf131Q8NDD1 294 aaKnown RBP22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TMEM47Q9BQJ4 181 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 ZMYND12Q9H0C1 365 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 ATP8A2Q9NTI2 1148 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 GGA2Q9UJY4 613 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TMCO5BA8MYB1 307 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 KIF4AO95239 1232 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TDP2O95551 362 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 RPSAP08865 295 aaKnown RBP22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 KRT25Q7Z3Z0 450 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 CPLX4Q7Z7G2 160 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 TSG101Q99816 390 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 MINPP1Q9UNW1 487 aa22.43■■□□□ 1.18
SMARCD2-203ENST00000448276 CASZ1Q86V15 1759 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 KRT71Q3SY84 523 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 SCFD2Q8WU76 684 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 SGSM3Q96HU1 749 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 ACTR5Q9H9F9 607 aaPredicted RBP22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 TTI1O43156 1089 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 PTK2Q05397 1052 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 TBC1D31Q96DN5 1066 aa22.42■■□□□ 1.18
SMARCD2-203ENST00000448276 PVALEFA0A1B0GWK0 134 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 C21orf2O43822 256 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 PPP1R12BO60237 982 aaPredicted RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 CALCRLQ16602 461 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 METTL13Q8N6R0 699 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 SNX29Q8TEQ0 813 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 RAD54LQ92698 747 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 HVCN1Q96D96 273 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 NOC2LQ9Y3T9 749 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 DRP2Q13474 957 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 ASIC2Q16515 512 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 INTS5Q6P9B9 1019 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 MYOCDQ8IZQ8 938 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 CELF1Q92879 486 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 LRRC45Q96CN5 670 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 UBA5Q9GZZ9 404 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 VEZTQ9HBM0 779 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 LUC7LQ9NQ29 371 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 SAP30BPQ9UHR5 308 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 BCL9O00512 1426 aa22.41■■□□□ 1.18
SMARCD2-203ENST00000448276 NPHP3-ACAD11A0A0J9YXS1 232 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 PALM3A6NDB9 673 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 KRIT1O00522 736 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 MYCNP04198 464 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 GNAQP50148 359 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 DHX9Q08211 1270 aaKnown RBP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 UBE4AQ14139 1066 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 GALNT17Q6IS24 598 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 ZNF571Q7Z3V5 609 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 TATDN2Q93075 761 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 ACSBG1Q96GR2 724 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 F8W031 263 aaPredicted RBP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 CAMTA2O94983 1202 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 COASYQ13057 564 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 MIEF2Q96C03 454 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 PIGSQ96S52 555 aa22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMARCD2-203ENST00000448276 FKBP3Q00688 224 aaKnown RBP22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 CUL1Q13616 776 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 ERFEQ4G0M1 354 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 SBK1Q52WX2 424 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 C12orf60Q5U649 245 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 ADAT2Q7Z6V5 191 aaKnown RBP22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 TRIM51Q9BSJ1 452 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 EDEM3Q9BZQ6 932 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 C6orf50Q9HD87 102 aa22.39■■□□□ 1.18
SMARCD2-203ENST00000448276 ABCB11O95342 1321 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 DRD4P21917 467 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 COPB2P35606 906 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 USP11P51784 963 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 ACCSLQ4AC99 568 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 RUFY4Q6ZNE9 571 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 PNMA2Q9UL42 364 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 ATP8A1Q9Y2Q0 1164 aa22.39■■□□□ 1.17
SMARCD2-203ENST00000448276 BIRC3Q13489 604 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 ZCWPW2Q504Y3 356 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 TMC3Q7Z5M5 1100 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 CCT6BQ92526 530 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 MTMR9Q96QG7 549 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 NR2E1Q9Y466 385 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 SMIM23A6NLE4 172 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 EDIL3O43854 480 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 SLC9A1P19634 815 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 PAX7P23759 505 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 SOGA3Q5TF21 947 aa22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 GKAP1Q5VSY0 366 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 SH3RF3Q8TEJ3 882 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 SYN2Q92777 582 aaPredicted RBP22.38■■□□□ 1.17
SMARCD2-203ENST00000448276 CLSTN1O94985 981 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 CRKLP46109 303 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 BAIAP2L1Q9UHR4 511 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms