RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 AGXT2Q9BYV1 514 aa20.23■□□□□ 0.83
DDX56-207ENST00000448192 KCNH7Q9NS40 1196 aa20.23■□□□□ 0.83
DDX56-207ENST00000448192 NID2Q14112 1375 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 GSTTP1A0A1W2PQM5 241 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 RBAK-RBAKDNI3L0D1 243 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
DDX56-207ENST00000448192 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 CXCL10P02778 98 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 HOXC8P31273 242 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 ZNF76P36508 570 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 CCT2P78371 535 aaKnown RBP20.22■□□□□ 0.83
DDX56-207ENST00000448192 ARHGAP4P98171 946 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 AKAP17AQ02040 695 aaKnown RBP20.22■□□□□ 0.83
DDX56-207ENST00000448192 AP3B2Q13367 1082 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 JAKMIP3Q5VZ66 844 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 HERC6Q8IVU3 1022 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 GLG1Q92896 1179 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 PRUNE2Q8WUY3 3088 aa20.22■□□□□ 0.83
DDX56-207ENST00000448192 RSPH10B2B2RC85 870 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 PRPF3O43395 683 aaKnown RBP20.21■□□□□ 0.83
DDX56-207ENST00000448192 RSPH10BP0C881 870 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 MARK3P27448 753 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 CLK2P49760 499 aaKnown RBP20.21■□□□□ 0.83
DDX56-207ENST00000448192 WDR5P61964 334 aaKnown RBP20.21■□□□□ 0.83
DDX56-207ENST00000448192 MBTPS1Q14703 1052 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 TCTN1Q2MV58 587 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 CEP55Q53EZ4 464 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 LMBR1Q8WVP7 490 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 ZSWIM6Q9HCJ5 1215 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 JPH1Q9HDC5 661 aaPredicted RBP20.21■□□□□ 0.83
DDX56-207ENST00000448192 CYP46A1Q9Y6A2 500 aa20.21■□□□□ 0.83
DDX56-207ENST00000448192 CHD7Q9P2D1 2997 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 DLL1O00548 723 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 CA3P07451 260 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 CTSHP09668 335 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 ARP10275 920 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 PDIA3P30101 505 aaKnown RBP20.2■□□□□ 0.82
DDX56-207ENST00000448192 SREBF1P36956 1147 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 IKBKEQ14164 716 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 PKN1Q16512 942 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 CCDC12Q8WUD4 166 aaPredicted RBP20.2■□□□□ 0.82
DDX56-207ENST00000448192 SDF4Q9BRK5 362 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 NCOA5Q9HCD5 579 aaKnown RBP20.2■□□□□ 0.82
DDX56-207ENST00000448192 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 ERAP1Q9NZ08 941 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 SLC9A2Q9UBY0 812 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 EMSYQ7Z589 1322 aa20.2■□□□□ 0.82
DDX56-207ENST00000448192 ABHD14A-ACY1A0A1B0GW23 586 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 LGR5O75473 907 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 IGFBP4P22692 258 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 TMCO2Q7Z6W1 182 aaPredicted RBP20.19■□□□□ 0.82
DDX56-207ENST00000448192 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 NRCAMQ92823 1304 aa20.19■□□□□ 0.82
DDX56-207ENST00000448192 ESYT2A0FGR8 921 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 MEIS1O00470 390 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 ADAMTS3O15072 1205 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 TLL1O43897 1013 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 EVCP57679 992 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 ADAM17P78536 824 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 DEFB103AP81534 67 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 PPFIA1Q13136 1202 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 TOB2Q14106 344 aaPredicted RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 NTRK3Q16288 839 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 ERICH6BQ5W0A0 696 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 REXO1Q8N1G1 1221 aaKnown RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 LARP6Q9BRS8 491 aaKnown RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 RNF26Q9BY78 433 aaPredicted RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 ZMYND12Q9H0C1 365 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 CERS4Q9HA82 394 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 AGO4Q9HCK5 861 aaKnown RBP20.18■□□□□ 0.82
DDX56-207ENST00000448192 NFASCO94856 1347 aa20.18■□□□□ 0.82
DDX56-207ENST00000448192 MICAL3Q7RTP6 2002 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 EFCAB14O75071 495 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 CAND2O75155 1236 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 IFNAR1P17181 557 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 GNA11P29992 359 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 ITGB3BPQ13352 177 aaPredicted RBP20.17■□□□□ 0.82
DDX56-207ENST00000448192 DBF4BQ8NFT6 615 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 TM6SF1Q9BZW5 370 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 AZI2Q9H6S1 392 aa20.17■□□□□ 0.82
DDX56-207ENST00000448192 DDX39AO00148 427 aaKnown RBP20.16■□□□□ 0.82
DDX56-207ENST00000448192 ACTR2P61160 394 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 IGBP1P78318 339 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 GRIK4Q16099 956 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 MCTP2Q6DN12 878 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 USP38Q8NB14 1042 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 UIMC1Q96RL1 719 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
DDX56-207ENST00000448192 FAM86B1E9PN63 330 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 FAM86B2P0C5J1 330 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 TAP1Q03518 808 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 CCDC85BQ15834 202 aaPredicted RBP20.15■□□□□ 0.82
DDX56-207ENST00000448192 PLEKHG4Q58EX7 1191 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms