RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 SLC23A3Q6PIS1 610 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 ZNF34Q8IZ26 560 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 AGBL3Q8NEM8 1001 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 GRAPLQ8TC17 118 aaPredicted RBP7.55□□□□□ -1.2
USP49-205ENST00000448078 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
USP49-205ENST00000448078 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 ADGRE2Q9UHX3 823 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
USP49-205ENST00000448078 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 ST14Q9Y5Y6 855 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 THSD7BQ9C0I4 1608 aa7.55□□□□□ -1.2
USP49-205ENST00000448078 IBTKQ9P2D0 1353 aaPredicted RBP7.55□□□□□ -1.2
USP49-205ENST00000448078 UBE2Q2LH0YL09 131 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
USP49-205ENST00000448078 PRKAR2BP31323 418 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
USP49-205ENST00000448078 SLC4A8Q2Y0W8 1093 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 RASAL3Q86YV0 1011 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 Q96M66 194 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 PNNQ9H307 717 aaKnown RBP7.54□□□□□ -1.2
USP49-205ENST00000448078 SEMA3GQ9NS98 782 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 GGA3Q9NZ52 723 aa7.54□□□□□ -1.2
USP49-205ENST00000448078 ABCC4O15439 1325 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 LTBP1Q14766 1721 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 MANSC4A6NHS7 340 aaPredicted RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 ECE2O60344 883 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 NTSR2O95665 410 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 VIL1P09327 827 aaKnown RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 U2AF1L5P0DN76 240 aaPredicted RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 NME1P15531 152 aaKnown RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 U2AF1Q01081 240 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP49-205ENST00000448078 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 CDCP2Q5VXM1 449 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 NFXL1Q6ZNB6 911 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 MCM10Q7L590 875 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 METTL16Q86W50 562 aaKnown RBP7.53□□□□□ -1.2
USP49-205ENST00000448078 VPS37DQ86XT2 251 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 DPF3Q92784 378 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 CCDC120Q96HB5 630 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 DHRS1Q96LJ7 313 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 SLC6A18Q96N87 628 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 TGIF2Q9GZN2 237 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 ACBD3Q9H3P7 528 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 DBNDD1Q9H9R9 158 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 CAPN10Q9HC96 672 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 GINM1Q9NU53 330 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 FAM86C1Q9NVL1 165 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 LMCD1Q9NZU5 365 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 CEMIPQ8WUJ3 1361 aa7.53□□□□□ -1.2
USP49-205ENST00000448078 SH3TC1Q8TE82 1336 aa7.52□□□□□ -1.2
USP49-205ENST00000448078 RIC1Q4ADV7 1423 aa7.52□□□□□ -1.2
USP49-205ENST00000448078 COL11A2P13942 1736 aaPredicted RBP7.52□□□□□ -1.2
USP49-205ENST00000448078 ARFGEF2Q9Y6D5 1785 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 YDJCA8MPS7 323 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 E9PSI1 815 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 MEIS1O00470 390 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 UBOX5O94941 541 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 TCF3P15923 654 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 EGR3Q06889 387 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 NMIQ13287 307 aaPredicted RBP7.52□□□□□ -1.21
USP49-205ENST00000448078 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
USP49-205ENST00000448078 PPP2R5EQ16537 467 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 DLK2Q6UY11 383 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 TTLL7Q6ZT98 887 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 CCDC144CPQ8IYA2 1237 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 MBNL3Q9NUK0 354 aaKnown RBP7.52□□□□□ -1.21
USP49-205ENST00000448078 ADAMTS6Q9UKP5 1117 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 AKAP11Q9UKA4 1901 aa7.52□□□□□ -1.21
USP49-205ENST00000448078 ABCC12Q96J65 1359 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 SHTN1A0MZ66 631 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 HSPA5P11021 654 aaKnown RBP7.51□□□□□ -1.21
USP49-205ENST00000448078 RAC2P15153 192 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 NASPP49321 788 aaPredicted RBP7.51□□□□□ -1.21
USP49-205ENST00000448078 HK2P52789 917 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 ZNF280AP59817 542 aaPredicted RBP7.51□□□□□ -1.21
USP49-205ENST00000448078 RPS8P62241 208 aaKnown RBP7.51□□□□□ -1.21
USP49-205ENST00000448078 KIF22Q14807 665 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 ASIC4Q96FT7 647 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 MYOZ2Q9NPC6 264 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 MIS18AQ9NYP9 233 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 NR2E3Q9Y5X4 410 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 CACNA1SQ13698 1873 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 SCN7AQ01118 1682 aa7.51□□□□□ -1.21
USP49-205ENST00000448078 EN2P19622 333 aaPredicted RBP7.5□□□□□ -1.21
USP49-205ENST00000448078 CCNFP41002 786 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 SP3Q02447 781 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 CNGB1Q14028 1251 aaPredicted RBP7.5□□□□□ -1.21
USP49-205ENST00000448078 SLC9C1Q4G0N8 1177 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 OTOP1Q7RTM1 612 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 TSPYL5Q86VY4 417 aaPredicted RBP7.5□□□□□ -1.21
USP49-205ENST00000448078 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms