RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-204ENST00000447684 A0A0G2JS52 829 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 SSU72P8A0A1W2PR75 194 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 F8VZ95 297 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 SMNDC1O75940 238 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■□□□ 12.7
CNOT3-204ENST00000447684 CTSWP56202 376 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 CNNM4Q6P4Q7 775 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 CCHCR1Q8TD31 782 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 PRMT1Q99873 361 aaKnown RBP17.52■□□□□ 0.4
CNOT3-204ENST00000447684 MTFR1LQ9H019 292 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 UBOX5O94941 541 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 MYBP10242 640 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
CNOT3-204ENST00000447684 TXNRD1Q16881 649 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 FAM47AQ5JRC9 791 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 ERICH1Q86X53 443 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
CNOT3-204ENST00000447684 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
CNOT3-204ENST00000447684 ETAA1Q9NY74 926 aa17.52■□□□□ 0.4
CNOT3-204ENST00000447684 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
CNOT3-204ENST00000447684 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 EVI5O60447 810 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 TLR2O60603 784 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 MYL1P05976 194 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 NQO1P15559 274 aaKnown RBP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 KLHL30Q0D2K2 578 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 LRRC41Q15345 812 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ADAT2Q7Z6V5 191 aaKnown RBP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ECT2Q9H8V3 914 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 MYH3P11055 1940 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 CFAP73A6NFT4 308 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 PGRMC1O00264 195 aaKnown RBP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 IRF6O14896 467 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 SHBGP04278 402 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 SERPING1P05155 500 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 CALM1P0DP23 149 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 CALM2P0DP24 149 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 CALM3P0DP25 149 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ACSBG1Q96GR2 724 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 PLCD4Q9BRC7 762 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 GSTA1P08263 222 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 FGFR2P21802 821 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 BCAMP50895 628 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ICA1Q05084 483 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 GNPTABQ3T906 1256 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 KLHL29Q96CT2 875 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ZNF317Q96PQ6 595 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-204ENST00000447684 TRIM51Q9BSJ1 452 aa17.51■□□□□ 0.39
CNOT3-204ENST00000447684 ERVV-2B6SEH9 535 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 SNUPNO95149 360 aaKnown RBP17.5■□□□□ 0.39
CNOT3-204ENST00000447684 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CNOT3-204ENST00000447684 CCDC26Q8TAB7 109 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
CNOT3-204ENST00000447684 SLC5A1P13866 664 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 CALML3P27482 149 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 SLCO1A2P46721 670 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 RIPK1Q13546 671 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 MGARPQ8TDB4 240 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 CCSER1Q9C0I3 900 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 TMEM59LQ9UK28 342 aa17.5■□□□□ 0.39
CNOT3-204ENST00000447684 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
CNOT3-204ENST00000447684 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 TECP42680 631 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 SEMA3FQ13275 785 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 PRPF4BQ13523 1007 aaKnown RBP17.49■□□□□ 0.39
CNOT3-204ENST00000447684 SLC18A3Q16572 532 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 ADGRA1Q86SQ6 560 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 DAAM2Q86T65 1068 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 HOOK3Q86VS8 718 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 DYDC1Q8WWB3 177 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 FMO2Q99518 471 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 AZI2Q9H6S1 392 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 SLC5A4Q9NY91 659 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 MYH7BA7E2Y1 1941 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
CNOT3-204ENST00000447684 EVX2Q03828 476 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 KCNMA1Q12791 1236 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 TAF11Q15544 211 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 CENPPQ6IPU0 288 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 OSBPL1AQ9BXW6 950 aa17.49■□□□□ 0.39
CNOT3-204ENST00000447684 MPHOSPH10O00566 681 aaKnown RBP17.48■□□□□ 0.39
CNOT3-204ENST00000447684 FGFR1OPO95684 399 aaKnown RBP17.48■□□□□ 0.39
CNOT3-204ENST00000447684 IFI35P80217 286 aaPredicted RBP17.48■□□□□ 0.39
CNOT3-204ENST00000447684 AMPD3Q01432 767 aa17.48■□□□□ 0.39
CNOT3-204ENST00000447684 ZNF268Q14587 947 aaPredicted RBP17.48■□□□□ 0.39
CNOT3-204ENST00000447684 ITIH4Q14624 930 aa17.48■□□□□ 0.39
CNOT3-204ENST00000447684 LETM2Q2VYF4 491 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms