RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SNHG28P0DPA3 235 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 RPS6KA3P51812 740 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 NDUFA8P51970 172 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 DGKHQ86XP1 1220 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 MICAL1Q8TDZ2 1067 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 SAAL1Q96ER3 474 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 CCDC51Q96ER9 411 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 SLC40A1Q9NP59 571 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 POLR3EQ9NVU0 708 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 MORF4L1Q9UBU8 362 aa14.46□□□□□ -0.1
DDX56-206ENST00000446987 A0A087WWV3 80 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 GOLGA6BA6NDN3 693 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 PDHBP11177 359 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 OSBPP22059 807 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 GCKP35557 465 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 NAP1L1P55209 391 aaKnown RBP14.45□□□□□ -0.1
DDX56-206ENST00000446987 FAM110CQ1W6H9 321 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 ALS2CLQ60I27 953 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 SLFN13Q68D06 897 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 C1orf131Q8NDD1 294 aaKnown RBP14.45□□□□□ -0.1
DDX56-206ENST00000446987 REPS2Q8NFH8 660 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 CD99L2Q8TCZ2 262 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 SMCR8Q8TEV9 937 aaPredicted RBP14.45□□□□□ -0.1
DDX56-206ENST00000446987 ATG4CQ96DT6 458 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 INTS13Q9NVM9 706 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 BTBD7Q9P203 1132 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 ADAMTS5Q9UNA0 930 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
DDX56-206ENST00000446987 JAK2O60674 1132 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 FKTNO75072 461 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 ZNF202O95125 648 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 CMA1P23946 247 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 DSG3P32926 999 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 SP3Q02447 781 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 RALYLQ86SE5 291 aaKnown RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 LINC00301Q8NCQ3 95 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 MYPNQ86TC9 1320 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 FAM237AA0A1B0GTK4 181 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 AKR1B15C9JRZ8 316 aaPredicted RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 PRC1O43663 620 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 COQ9O75208 318 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 FLOT1O75955 427 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 LACTBP83111 547 aaPredicted RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 APBA1Q02410 837 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 CKAP4Q07065 602 aaKnown RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 Q3C1V9 767 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 DRAXINQ8NBI3 349 aaPredicted RBP14.44□□□□□ -0.1
DDX56-206ENST00000446987 OR8K1Q8NGG5 319 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 EPN3Q9H201 632 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 LY9Q9HBG7 655 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 FAM184BQ9ULE4 1060 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 PPP1R9AQ9ULJ8 1098 aa14.44□□□□□ -0.1
DDX56-206ENST00000446987 SH2B2O14492 632 aaPredicted RBP14.43□□□□□ -0.1
DDX56-206ENST00000446987 RAD21O60216 631 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 BMP3P12645 472 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 GCLCP48506 637 aaPredicted RBP14.43□□□□□ -0.1
DDX56-206ENST00000446987 EXOSC10Q01780 885 aaKnown RBP14.43□□□□□ -0.1
DDX56-206ENST00000446987 COG2Q14746 738 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 CYB5D1Q6P9G0 228 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 C6orf89Q6UWU4 347 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 CRELD2Q6UXH1 353 aaPredicted RBP14.43□□□□□ -0.1
DDX56-206ENST00000446987 CCNI2Q6ZMN8 369 aaPredicted RBP14.43□□□□□ -0.1
DDX56-206ENST00000446987 KCTD1Q719H9 257 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 TCEANC2Q96MN5 208 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 UBAC1Q9BSL1 405 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 LRRC2Q9BYS8 371 aa14.43□□□□□ -0.1
DDX56-206ENST00000446987 ZNF236Q9UL36 1845 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 COL13A1Q5TAT6 717 aaPredicted RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 NOA1Q8NC60 698 aaKnown RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 DCAF4Q8WV16 495 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 TRIM47Q96LD4 638 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 NEK1Q96PY6 1258 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 SELENOOQ9BVL4 669 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 MTMR7Q9Y216 660 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 A0A1B0GVL5 298 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 IFIT3O14879 490 aaKnown RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 AHCYL1O43865 530 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 ZNF18P17022 549 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 SLC1A4P43007 532 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 ERVK-9P63128 1117 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 ERVK-24P63145 666 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 CEBPZQ03701 1054 aaKnown RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 ZNF543Q08ER8 600 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 SLC35G1Q2M3R5 365 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 IFIT1BQ5T764 474 aaKnown RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 KDM7AQ6ZMT4 941 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 APLFQ8IW19 511 aaPredicted RBP14.42□□□□□ -0.1
DDX56-206ENST00000446987 SLC35F6Q8N357 371 aa14.42□□□□□ -0.1
DDX56-206ENST00000446987 NSUN7Q8NE18 718 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms