RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 CHRNA1P02708 482 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 NT5C2P49902 561 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 CAMK1Q14012 370 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 LMBR1Q8WVP7 490 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 MSLNLQ96KJ4 702 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 PCDHA1Q9Y5I3 950 aa17.16■□□□□ 0.34
UBE2F-216ENST00000445676 RIF1Q5UIP0 2472 aaKnown RBP17.16■□□□□ 0.34
UBE2F-216ENST00000445676 TMEM221A6NGB7 291 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 M0R296 226 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 NOP56O00567 594 aaKnown RBP17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ZBTB5O15062 677 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 GHRP10912 638 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 GNAT1P11488 350 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 PTPN5P54829 565 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ADAM15Q13444 863 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 SAMD3Q8N6K7 520 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ZNF689Q96CS4 500 aaPredicted RBP17.15■□□□□ 0.34
UBE2F-216ENST00000445676 GPR20Q99678 358 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
UBE2F-216ENST00000445676 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 PLXNA3P51805 1871 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 FAM186AA6NE01 2351 aa17.15■□□□□ 0.34
UBE2F-216ENST00000445676 MYO15AQ9UKN7 3530 aa17.14■□□□□ 0.34
UBE2F-216ENST00000445676 EYA4O95677 639 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 NDUFV1P49821 464 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
UBE2F-216ENST00000445676 MGAT3Q09327 533 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 TCF15Q12870 199 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 RUFY4Q6ZNE9 571 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 TRIM67Q6ZTA4 783 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 ADGRD2Q7Z7M1 963 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
UBE2F-216ENST00000445676 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 FRMPD4Q14CM0 1322 aa17.14■□□□□ 0.33
UBE2F-216ENST00000445676 FNDC1Q4ZHG4 1894 aaPredicted RBP17.14■□□□□ 0.33
UBE2F-216ENST00000445676 KLRF2D3W0D1 207 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 GCOM1H8Y6P7 765 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-216ENST00000445676 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 DNAJB1P25685 340 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 ICAM3P32942 547 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
UBE2F-216ENST00000445676 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-216ENST00000445676 LPIN1Q14693 890 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 SMRP1Q8NCR6 262 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 LINC01599Q8WXQ3 324 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 PBXIP1Q96AQ6 731 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-216ENST00000445676 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-216ENST00000445676 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
UBE2F-216ENST00000445676 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 LOC730098B7Z3J9 87 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 ENPP3O14638 875 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 ST18O60284 1047 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
UBE2F-216ENST00000445676 ZXDAP98168 799 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 NEDD9Q14511 834 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 GNPTABQ3T906 1256 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
UBE2F-216ENST00000445676 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
UBE2F-216ENST00000445676 MRPL42Q9Y6G3 142 aaKnown RBP17.12■□□□□ 0.33
UBE2F-216ENST00000445676 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
UBE2F-216ENST00000445676 SPATA31C2B4DYI2 1134 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 DGKIO75912 1065 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 GLP2RO95838 553 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 ITGB1P05556 798 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 SDSP20132 328 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 SP4Q02446 784 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
UBE2F-216ENST00000445676 SEC23AQ15436 765 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 IFIT1BQ5T764 474 aaKnown RBP17.11■□□□□ 0.33
UBE2F-216ENST00000445676 P2RX5Q93086 422 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
UBE2F-216ENST00000445676 COASYQ13057 564 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 FBXO47Q5MNV8 452 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
UBE2F-216ENST00000445676 FBXL6Q8N531 539 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 PIGSQ96S52 555 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 PRRX2Q99811 253 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 FAM86C1Q9NVL1 165 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
UBE2F-216ENST00000445676 FIBPO43427 364 aa17.09■□□□□ 0.33
UBE2F-216ENST00000445676 CYTH3O43739 400 aa17.09■□□□□ 0.33
UBE2F-216ENST00000445676 STAM2O75886 525 aa17.09■□□□□ 0.33
UBE2F-216ENST00000445676 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
UBE2F-216ENST00000445676 PKN1Q16512 942 aa17.09■□□□□ 0.33
UBE2F-216ENST00000445676 TAF2Q6P1X5 1199 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms