RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 SHHQ15465 462 aa22.36■■□□□ 1.17
NELFE-206ENST00000444811 CCDC83Q8IWF9 413 aa22.36■■□□□ 1.17
NELFE-206ENST00000444811 WASF1Q92558 559 aa22.36■■□□□ 1.17
NELFE-206ENST00000444811 DHX38Q92620 1227 aaKnown RBP22.36■■□□□ 1.17
NELFE-206ENST00000444811 PCYT2Q99447 389 aa22.36■■□□□ 1.17
NELFE-206ENST00000444811 UPF2Q9HAU5 1272 aaKnown RBP22.36■■□□□ 1.17
NELFE-206ENST00000444811 DHX15O43143 795 aaKnown RBP22.35■■□□□ 1.17
NELFE-206ENST00000444811 XBP1P17861 261 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 HOXC8P31273 242 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 USP11P51784 963 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 SETQ01105 290 aaPredicted RBP22.35■■□□□ 1.17
NELFE-206ENST00000444811 LRIT3Q3SXY7 679 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 C16orf59Q7L2K0 433 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 OXER1Q8TDS5 423 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 VWCEQ96DN2 955 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
NELFE-206ENST00000444811 UIMC1Q96RL1 719 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 SDF4Q9BRK5 362 aa22.35■■□□□ 1.17
NELFE-206ENST00000444811 CCNE2O96020 404 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 SMIM10L2AP0DMW4 78 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 SMIM10L2BP0DMW5 78 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 ACTR2P61160 394 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 PPIGQ13427 754 aaKnown RBP eCLIP22.34■■□□□ 1.171e-7■■■■□ 22.6
NELFE-206ENST00000444811 PRR16Q569H4 304 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 NOD1Q9Y239 953 aa22.34■■□□□ 1.17
NELFE-206ENST00000444811 TRIP12Q14669 1992 aaPredicted RBP22.34■■□□□ 1.17
NELFE-206ENST00000444811 IPO5O00410 1097 aaKnown RBP22.33■■□□□ 1.17
NELFE-206ENST00000444811 LGR5O75473 907 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 ATG7O95352 703 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 KRT25Q7Z3Z0 450 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 SLC17A8Q8NDX2 589 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 WNT8BQ93098 351 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 SCLYQ96I15 445 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 ZNF577Q9BSK1 485 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 BACH2Q9BYV9 841 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 RNPEPQ9H4A4 650 aa22.33■■□□□ 1.17
NELFE-206ENST00000444811 SH2B1Q9NRF2 756 aaPredicted RBP22.33■■□□□ 1.17
NELFE-206ENST00000444811 ZNF215Q9UL58 517 aaPredicted RBP22.33■■□□□ 1.17
NELFE-206ENST00000444811 VCANP13611 3396 aa22.33■■□□□ 1.16
NELFE-206ENST00000444811 EMSYQ7Z589 1322 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 TANC1Q9C0D5 1861 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 EYSQ5T1H1 3165 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 DDX39AO00148 427 aaKnown RBP22.32■■□□□ 1.16
NELFE-206ENST00000444811 PITPNM1O00562 1244 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 CD2BP2O95400 341 aaKnown RBP22.32■■□□□ 1.16
NELFE-206ENST00000444811 ACRP10323 421 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 RBL2Q08999 1139 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 NONOQ15233 471 aaKnown RBP eCLIP22.32■■□□□ 1.16
NELFE-206ENST00000444811 INF2Q27J81 1249 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 TRIM71Q2Q1W2 868 aaKnown RBP22.32■■□□□ 1.16
NELFE-206ENST00000444811 TMEM240Q5SV17 173 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 MBOAT7Q96N66 472 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.32■■□□□ 1.162e-7■■□□□ 14.2
NELFE-206ENST00000444811 LLPHQ9BRT6 129 aaKnown RBP22.32■■□□□ 1.16
NELFE-206ENST00000444811 IL23AQ9NPF7 189 aa22.32■■□□□ 1.16
NELFE-206ENST00000444811 CYP3A7-CYP3A51PA0A087WV96 503 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 C17orf102A2RUQ5 167 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 MSH4O15457 936 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 TDP2O95551 362 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 CYP3A7P24462 503 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 FOSBP53539 338 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 ADAM17P78536 824 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 PTK7Q13308 1070 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 EARS2Q5JPH6 523 aaKnown RBP22.31■■□□□ 1.16
NELFE-206ENST00000444811 GPR153Q6NV75 609 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 Q7L0L9 218 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 CAGE1Q8TC20 777 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 TNFRSF25Q93038 417 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 SETD4Q9NVD3 440 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 SCN5AQ14524 2016 aa22.31■■□□□ 1.16
NELFE-206ENST00000444811 CDH23Q9H251 3354 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 IGKV6D-21A0A0A0MT36 114 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 IQCF3P0C7M6 154 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 MARK3P27448 753 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 NR5A1Q13285 461 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 BFSP2Q13515 415 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 Q4G0T1 1027 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 ABHD15Q6UXT9 468 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 SMARCAD1Q9H4L7 1026 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 TBC1D22BQ9NU19 505 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 ERAP1Q9NZ08 941 aa22.3■■□□□ 1.16
NELFE-206ENST00000444811 CCDC194A0A1B0GVG4 234 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 FAM205CA6NFA0 338 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 DLL1O00548 723 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 TREHO43280 583 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 ST18O60284 1047 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 MMP1P03956 469 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 KRT2P35908 639 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 KRT40Q6A162 431 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 TRAF7Q6Q0C0 670 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 MOXD1Q6UVY6 613 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 PIK3AP1Q6ZUJ8 805 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 SERINC5Q86VE9 423 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 GLG1Q92896 1179 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 ATP6V0A1Q93050 837 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 GJA10Q969M2 543 aa22.29■■□□□ 1.16
NELFE-206ENST00000444811 CKBP12277 381 aa22.28■■□□□ 1.16
NELFE-206ENST00000444811 GPNMBQ14956 572 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms