RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NLRX1Q86UT6 975 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 SERINC5Q86VE9 423 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 RNF26Q9BY78 433 aaPredicted RBP16.02■□□□□ 0.16
TREX1-202ENST00000444177 RNPEPQ9H4A4 650 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 PRDM6Q9NQX0 595 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 CPLX1O14810 134 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
TREX1-202ENST00000444177 SEC24BO95487 1268 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 SMIM10L2AP0DMW4 78 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 SMIM10L2BP0DMW5 78 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 IFNAR1P17181 557 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 HOXC8P31273 242 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 WDR5P61964 334 aaKnown RBP16.01■□□□□ 0.15
TREX1-202ENST00000444177 MBTPS1Q14703 1052 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 CCDC85BQ15834 202 aaPredicted RBP16.01■□□□□ 0.15
TREX1-202ENST00000444177 NTRK3Q16288 839 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 TCTN1Q2MV58 587 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 CCDC12Q8WUD4 166 aaPredicted RBP16.01■□□□□ 0.15
TREX1-202ENST00000444177 ATP6V0A1Q93050 837 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 ZNF274Q96GC6 653 aaPredicted RBP16.01■□□□□ 0.15
TREX1-202ENST00000444177 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
TREX1-202ENST00000444177 PRRC2BQ5JSZ5 2229 aaKnown RBP16■□□□□ 0.15
TREX1-202ENST00000444177 TANC1Q9C0D5 1861 aa16■□□□□ 0.15
TREX1-202ENST00000444177 ABHD14A-ACY1A0A1B0GW23 586 aa16■□□□□ 0.15
TREX1-202ENST00000444177 RBAK-RBAKDNI3L0D1 243 aa16■□□□□ 0.15
TREX1-202ENST00000444177 RFXAPO00287 272 aa16■□□□□ 0.15
TREX1-202ENST00000444177 TREHO43280 583 aa16■□□□□ 0.15
TREX1-202ENST00000444177 ATP9AO75110 1047 aa16■□□□□ 0.15
TREX1-202ENST00000444177 ITGB5P18084 799 aa16■□□□□ 0.15
TREX1-202ENST00000444177 THPOP40225 353 aa16■□□□□ 0.15
TREX1-202ENST00000444177 SP4Q02446 784 aa16■□□□□ 0.15
TREX1-202ENST00000444177 TAP1Q03518 808 aa16■□□□□ 0.15
TREX1-202ENST00000444177 AP3B2Q13367 1082 aa16■□□□□ 0.15
TREX1-202ENST00000444177 IKBKEQ14164 716 aa16■□□□□ 0.15
TREX1-202ENST00000444177 PKN1Q16512 942 aa16■□□□□ 0.15
TREX1-202ENST00000444177 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
TREX1-202ENST00000444177 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
TREX1-202ENST00000444177 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
TREX1-202ENST00000444177 GPRASP2Q96D09 838 aa16■□□□□ 0.15
TREX1-202ENST00000444177 ANO3Q9BYT9 981 aa16■□□□□ 0.15
TREX1-202ENST00000444177 GLT8D2Q9H1C3 349 aa16■□□□□ 0.15
TREX1-202ENST00000444177 CERS4Q9HA82 394 aa16■□□□□ 0.15
TREX1-202ENST00000444177 C6orf50Q9HD87 102 aa16■□□□□ 0.15
TREX1-202ENST00000444177 SETD4Q9NVD3 440 aa16■□□□□ 0.15
TREX1-202ENST00000444177 TRANK1O15050 2925 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 RSPH10B2B2RC85 870 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 TLL1O43897 1013 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 FOSP01100 380 aaPredicted RBP15.99■□□□□ 0.15
TREX1-202ENST00000444177 RSPH10BP0C881 870 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 DEFB103AP81534 67 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 MTMR1Q13613 665 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 C8orf34Q49A92 452 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 CPLX2Q6PUV4 134 aaKnown RBP15.99■□□□□ 0.15
TREX1-202ENST00000444177 TMCO2Q7Z6W1 182 aaPredicted RBP15.99■□□□□ 0.15
TREX1-202ENST00000444177 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 TEX2Q8IWB9 1127 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 CDHR1Q96JP9 859 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 PKD2L1Q9P0L9 805 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 UBIAD1Q9Y5Z9 338 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
TREX1-202ENST00000444177 ESYT2A0FGR8 921 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 EFCAB14O75071 495 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 LGR5O75473 907 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 GNAT1P11488 350 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 KCNA2P16389 499 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 CLK2P49760 499 aaKnown RBP15.98■□□□□ 0.15
TREX1-202ENST00000444177 AK2P54819 239 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
TREX1-202ENST00000444177 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 JAKMIP3Q5VZ66 844 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
TREX1-202ENST00000444177 ZBED2Q9BTP6 218 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
TREX1-202ENST00000444177 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
TREX1-202ENST00000444177 ZNF215Q9UL58 517 aaPredicted RBP15.98■□□□□ 0.15
TREX1-202ENST00000444177 EMSYQ7Z589 1322 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 GSTTP1A0A1W2PQM5 241 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 EPOPA6NHQ4 379 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 MAFGO15525 162 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 POU3F3P20264 500 aaPredicted RBP15.97■□□□□ 0.15
TREX1-202ENST00000444177 GNA11P29992 359 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 ADAM17P78536 824 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 SCRN1Q12765 414 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 TJAP1Q5JTD0 557 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
TREX1-202ENST00000444177 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 ARNTL2Q8WYA1 636 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 SEPT1Q8WYJ6 367 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 ZMYND12Q9H0C1 365 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 JADE2Q9NQC1 790 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 TPCN1Q9ULQ1 816 aa15.97■□□□□ 0.15
TREX1-202ENST00000444177 SPTBN5Q9NRC6 3674 aaKnown RBP15.96■□□□□ 0.15
TREX1-202ENST00000444177 LCHNA4D1U4 455 aa15.96■□□□□ 0.15
TREX1-202ENST00000444177 ADAMTS3O15072 1205 aa15.96■□□□□ 0.15
TREX1-202ENST00000444177 CDKL5O76039 1030 aa15.96■□□□□ 0.15
TREX1-202ENST00000444177 GJB5O95377 273 aa15.96■□□□□ 0.15
TREX1-202ENST00000444177 DEXIO95424 95 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms