RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 POLR2FP61218 127 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 TMC4Q7Z404 712 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TMC3Q7Z5M5 1100 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 RBM5P52756 815 aaKnown RBP eCLIP5.45□□□□□ -1.54
HERC1-201ENST00000443617 C6orf163Q5TEZ5 329 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 RUNDC3BQ96NL0 473 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 H0Y3Z8 333 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 USP11P51784 963 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 CALCOCO2Q13137 446 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PHLDB2Q86SQ0 1253 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 SYCP3Q8IZU3 236 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 LRRC37BQ96QE4 947 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TUBB6Q9BUF5 446 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 DDX47Q9H0S4 455 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.45□□□□□ -1.54
HERC1-201ENST00000443617 LRRC42Q9Y546 428 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 MAP3K4Q9Y6R4 1608 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ANKARQ7Z5J8 1434 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 USP31Q70CQ4 1352 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GSTT1P30711 240 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 IGHMBP2P38935 993 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 ATP2C1P98194 919 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 RXFP1Q9HBX9 757 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 CDC42BPAQ5VT25 1732 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PRR36Q9H6K5 1346 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ADD2P35612 726 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 NCALDP61601 193 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 RABL6Q3YEC7 729 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 KLHDC7AQ5VTJ3 777 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 OTUD6AQ7L8S5 288 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ZSCAN29Q8IWY8 852 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 STK32AQ8WU08 396 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 AMOTL2Q9Y2J4 779 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ABCC12Q96J65 1359 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 SSU72P8A0A1W2PR75 194 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ANKRD33BA6NCL7 494 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 FYB2Q5VWT5 728 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.45□□□□□ -1.54
HERC1-201ENST00000443617 IRF2BP1Q8IU81 584 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ZCWPW1Q9H0M4 648 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 METP08581 1390 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GNAQP50148 359 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 CACNA2D1P54289 1103 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TMEM266Q2M3C6 531 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TMTC3Q6ZXV5 915 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 RNF26Q9BY78 433 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 MLXIPLQ9NP71 852 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 USP40Q9NVE5 1235 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 MTMR7Q9Y216 660 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 WASHC2DQ5SRD0 308 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ARMC3Q5W041 872 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ARHGAP27Q6ZUM4 889 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SESTD1Q86VW0 696 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ERICH1Q86X53 443 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 HIC2Q96JB3 615 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 F8W031 263 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 O00370 1275 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PJA2O43164 708 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ANXA13P27216 316 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 GIMAP8Q8ND71 665 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 ANKS1AQ92625 1134 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ATXN10Q9UBB4 475 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PCDHGC5Q9Y5F6 944 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SHPRHQ149N8 1683 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 FAM187AA6NFU0 413 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 LMNB1P20700 586 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 CCDC105Q8IYK2 499 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 NLRP3Q96P20 1036 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ADAMTS1Q9UHI8 967 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PACSIN2Q9UNF0 486 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 CAPN6Q9Y6Q1 641 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SCG2P13521 617 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 INF2Q27J81 1249 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 NT5C3AQ9H0P0 336 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 CEP72Q9P209 647 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
HERC1-201ENST00000443617 DDAH1O94760 285 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 RARAP10276 462 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PTDSS1P48651 473 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 ADAT2Q7Z6V5 191 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 LCA5Q86VQ0 697 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ATXN2LQ8WWM7 1075 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 TGS1Q96RS0 853 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 SLC52A2Q9HAB3 445 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 SUCLA2Q9P2R7 463 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 DBR1Q9UK59 544 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 DCAF8L1A6NGE4 600 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 LINGO3P0C6S8 592 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 MARK3P27448 753 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 PEX5P50542 639 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 KPNB1Q14974 876 aaKnown RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 PDIA6Q15084 440 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 IFNL3Q8IZI9 196 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 ANGPTL2Q9UKU9 493 aa5.44□□□□□ -1.54
HERC1-201ENST00000443617 INO80Q9ULG1 1556 aaPredicted RBP5.44□□□□□ -1.54
HERC1-201ENST00000443617 TTI1O43156 1089 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms