RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 LY9Q9HBG7 655 aa8.93□□□□□ -0.98
CD44-211ENST00000442151 LMCD1Q9NZU5 365 aa8.93□□□□□ -0.98
CD44-211ENST00000442151 THEGQ9P2T0 379 aa8.93□□□□□ -0.98
CD44-211ENST00000442151 SCN10AQ9Y5Y9 1956 aa8.93□□□□□ -0.98
CD44-211ENST00000442151 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 SLC27A2O14975 620 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 PPP1R11O60927 126 aaPredicted RBP8.92□□□□□ -0.98
CD44-211ENST00000442151 LGR5O75473 907 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 CXCL10P02778 98 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 NECTIN1Q15223 517 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 APBB2Q92870 758 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 SAMD11Q96NU1 681 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 RAD9AQ99638 391 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 COL25A1Q9BXS0 654 aaPredicted RBP8.92□□□□□ -0.98
CD44-211ENST00000442151 LSG1Q9H089 658 aaKnown RBP8.92□□□□□ -0.98
CD44-211ENST00000442151 COG5Q9UP83 839 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 LCTP09848 1927 aa8.92□□□□□ -0.98
CD44-211ENST00000442151 SH2B2O14492 632 aaPredicted RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 OPLAHO14841 1288 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 CYTH3O43739 400 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 UBA1P22314 1058 aaKnown RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 PTGS1P23219 599 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 RCAN1P53805 252 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 IRX6P78412 446 aaPredicted RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 DHX32Q7L7V1 743 aaKnown RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 SGMS1Q86VZ5 419 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 CCDC12Q8WUD4 166 aaPredicted RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 SEPT1Q8WYJ6 367 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 YBX2Q9Y2T7 364 aaKnown RBP8.91□□□□□ -0.98
CD44-211ENST00000442151 INSL6Q9Y581 213 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 FRMPD4Q14CM0 1322 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 NRCAMQ92823 1304 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 KIAA1217Q5T5P2 1943 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 RRN3P2A6NIE6 340 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 THPOP40225 353 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 RABGGTBP53611 331 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 ANTXR2P58335 489 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 HSDL1Q3SXM5 330 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 TSGA10IPQ3SY00 556 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 TAF2Q6P1X5 1199 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 SERINC5Q86VE9 423 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 PIBF1Q8WXW3 757 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 PPM1EQ8WY54 764 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 C16orf70Q9BSU1 422 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 IL25Q9H293 177 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 SMARCAD1Q9H4L7 1026 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 RTEL1Q9NZ71 1219 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 TCEAL9Q9UHQ7 104 aa8.91□□□□□ -0.98
CD44-211ENST00000442151 UNC80Q8N2C7 3258 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 ZBTB43O43298 467 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 EIF5BO60841 1220 aaKnown RBP8.9□□□□□ -0.98
CD44-211ENST00000442151 CDC45O75419 566 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 LGALS2P05162 132 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 ZNF286BP0CG31 522 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 PSMA5P28066 241 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
CD44-211ENST00000442151 ODR4Q5SWX8 454 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 CYFIP1Q7L576 1253 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 SRBD1Q8N5C6 995 aaKnown RBP8.9□□□□□ -0.98
CD44-211ENST00000442151 ASB2Q96Q27 587 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 SDF4Q9BRK5 362 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 AZI2Q9H6S1 392 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 JADE2Q9NQC1 790 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 ERAP1Q9NZ08 941 aa8.9□□□□□ -0.98
CD44-211ENST00000442151 CA3P07451 260 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 SMIM10L2AP0DMW4 78 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 SMIM10L2BP0DMW5 78 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 ZNF76P36508 570 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 WDR5P61964 334 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 MRPS9P82933 396 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 AKAP17AQ02040 695 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 SP2Q02086 613 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 MTMR1Q13613 665 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 RTN1Q16799 776 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 PTPROQ16827 1216 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 ZNF618Q5T7W0 954 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 UTP14CQ5TAP6 766 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 TMTC3Q6ZXV5 915 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 HEATR3Q7Z4Q2 680 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 TGS1Q96RS0 853 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 GPR20Q99678 358 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 PCDHA6Q9UN73 950 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 PCDHA8Q9Y5H6 950 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 M0QZ92 97 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 MEIS2O14770 477 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 EPB41L2O43491 1005 aaKnown RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 GJB5O95377 273 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 SLC26A2P50443 739 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 NAPAP54920 295 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 TAP1Q03518 808 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 CCDC85BQ15834 202 aaPredicted RBP8.89□□□□□ -0.99
CD44-211ENST00000442151 FAM26DQ5JW98 314 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 IER5Q5VY09 327 aa8.89□□□□□ -0.99
CD44-211ENST00000442151 USP17L6PQ6QN14 398 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms