RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 OTOP1Q7RTM1 612 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 NOSTRINQ8IVI9 506 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 NXPE1Q8N323 547 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 KCNN1Q92952 543 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 RIC8BQ9NVN3 520 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 PCDHA5Q9Y5H7 936 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 PAX4O43316 350 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
PFDN4-202ENST00000441080 MC3RP41968 323 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 EPHB3P54753 998 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
PFDN4-202ENST00000441080 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
PFDN4-202ENST00000441080 CPA5Q8WXQ8 436 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 TOE1Q96GM8 510 aaKnown RBP6.91□□□□□ -1.3
PFDN4-202ENST00000441080 PDGFDQ9GZP0 370 aaPredicted RBP6.91□□□□□ -1.3
PFDN4-202ENST00000441080 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 IRS2Q9Y4H2 1338 aa6.91□□□□□ -1.3
PFDN4-202ENST00000441080 FAM90A27PA6NNH2 459 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 H7C1D1 291 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 N4BP3O15049 544 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 BUB1BO60566 1050 aaPredicted RBP6.9□□□□□ -1.3
PFDN4-202ENST00000441080 FAHP16930 419 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
PFDN4-202ENST00000441080 DLG4P78352 724 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 NKX3-2P78367 333 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 DSG1Q02413 1049 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 CACNB2Q08289 660 aaPredicted RBP6.9□□□□□ -1.3
PFDN4-202ENST00000441080 MESP2Q0VG99 397 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 STRN3Q13033 797 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 DHCR24Q15392 516 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
PFDN4-202ENST00000441080 CD300LDQ6UXZ3 194 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 IGDCC3Q8IVU1 814 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 FAM84AQ96KN4 292 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
PFDN4-202ENST00000441080 NGRNQ9NPE2 291 aaKnown RBP6.9□□□□□ -1.3
PFDN4-202ENST00000441080 PRAMEF25A6NGN4 478 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ETV2O00321 342 aaPredicted RBP6.89□□□□□ -1.31
PFDN4-202ENST00000441080 LRG1P02750 347 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 C8BP07358 591 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 TMEM253P0C7T8 217 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ZBTB48P10074 688 aaPredicted RBP6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ATF2P15336 505 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ATP2A2P16615 1042 aaKnown RBP6.89□□□□□ -1.31
PFDN4-202ENST00000441080 IL2P60568 153 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 SEC23AQ15436 765 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ZNF174Q15697 407 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 FAM26EQ8N5C1 309 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 SMC1BQ8NDV3 1235 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ZCRB1Q8TBF4 217 aaKnown RBP6.89□□□□□ -1.31
PFDN4-202ENST00000441080 USP7Q93009 1102 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 THG1LQ9NWX6 298 aaKnown RBP6.89□□□□□ -1.31
PFDN4-202ENST00000441080 COL4A3BPQ9Y5P4 624 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 B3GALT1Q9Y5Z6 326 aa6.89□□□□□ -1.31
PFDN4-202ENST00000441080 ACOT7O00154 380 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
PFDN4-202ENST00000441080 CYP2C8P10632 490 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
PFDN4-202ENST00000441080 GLDCP23378 1020 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 KIF11P52732 1056 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 NFKB2Q00653 900 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 PTPROQ16827 1216 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 CR1LQ2VPA4 569 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 STRA8Q7Z7C7 330 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 B3GNT8Q7Z7M8 397 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 SMARCC2Q8TAQ2 1214 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 CHTF18Q8WVB6 975 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 DLG3Q92796 817 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
PFDN4-202ENST00000441080 PPP1R16BQ96T49 567 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 PCIF1Q9H4Z3 704 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 OXSMQ9NWU1 459 aa6.88□□□□□ -1.31
PFDN4-202ENST00000441080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.87□□□□□ -1.31
PFDN4-202ENST00000441080 CPEP16870 476 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 IGFBP6P24592 240 aaPredicted RBP6.87□□□□□ -1.31
PFDN4-202ENST00000441080 KPNA1P52294 538 aaPredicted RBP6.87□□□□□ -1.31
PFDN4-202ENST00000441080 OCRLQ01968 901 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 CREB3L3Q68CJ9 461 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 TTC1Q99614 292 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 FAM126AQ9BYI3 521 aaPredicted RBP6.87□□□□□ -1.31
PFDN4-202ENST00000441080 H2AFY2Q9P0M6 372 aaPredicted RBP6.87□□□□□ -1.31
PFDN4-202ENST00000441080 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
PFDN4-202ENST00000441080 NFIBO00712 420 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 DVL2O14641 736 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 FKBP9O95302 570 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 BPIP17213 487 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 IBSPP21815 317 aaPredicted RBP6.86□□□□□ -1.31
PFDN4-202ENST00000441080 ADCYAP1R1P41586 468 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 LIMS1P48059 325 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 FOXO4P98177 505 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 ZNF648Q5T619 568 aaPredicted RBP6.86□□□□□ -1.31
PFDN4-202ENST00000441080 CC2D1AQ6P1N0 951 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms