RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 FAM160B2Q86V87 743 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 ERMNQ8TAM6 284 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 SNX29Q8TEQ0 813 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 RAD54LQ92698 747 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 NECAB3Q96P71 396 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-209ENST00000440653 MED15Q96RN5 788 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 C1QTNF1Q9BXJ1 281 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 TDRD3Q9H7E2 651 aaKnown RBP10.19□□□□□ -0.78
HDAC6-209ENST00000440653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC6-209ENST00000440653 TMEM260Q9NX78 707 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 PNMA2Q9UL42 364 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 ZBTB21Q9ULJ3 1066 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 MUC6Q6W4X9 2439 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 LRRC10BA6NIK2 292 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 PP2D1A8MPX8 630 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 LGALS16A8MUM7 142 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 F5H6K3 240 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 N4BP3O15049 544 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 RRP9O43818 475 aaKnown RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 GDF11O95390 407 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 GH2P01242 217 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TECP42680 631 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TXKP42681 527 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 PRCPP42785 496 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 COPB1P53618 953 aaKnown RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 LRRC63Q05C16 580 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 KLRC3Q07444 240 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 PDE4DQ08499 809 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 IKQ13123 557 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 KRT31Q15323 416 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 UBE2SQ16763 222 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 Q4G0T1 1027 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TMEM139Q8IV31 216 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 ZFPM1Q8IX07 1006 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 SMYD4Q8IYR2 804 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 TC2NQ8N9U0 490 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 P2RX5Q93086 422 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 MMTAG2Q9BU76 263 aaKnown RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 SRRTQ9BXP5 876 aaKnown RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 KCNMB3Q9NPA1 279 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 ZNF70Q9UC06 446 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-209ENST00000440653 RABGAP1Q9Y3P9 1069 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
HDAC6-209ENST00000440653 ADGRA2Q96PE1 1338 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
HDAC6-209ENST00000440653 MARCH6O60337 910 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 CCDC175P0C221 793 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-209ENST00000440653 CASP1P29466 404 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 CIITAP33076 1130 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 SLC16A2P36021 539 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 STX17P56962 302 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 ARHGAP4P98171 946 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 GRB10Q13322 594 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 VGLL4Q14135 290 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 TTI2Q6NXR4 508 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 GUF1Q8N442 669 aaKnown RBP10.17□□□□□ -0.78
HDAC6-209ENST00000440653 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 CHURC1Q8WUH1 139 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 STAMQ92783 540 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 FAM20AQ96MK3 541 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 ASB2Q96Q27 587 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 TSG101Q99816 390 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 EPHX3Q9H6B9 360 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 C11orf49Q9H6J7 331 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-209ENST00000440653 GDAQ9Y2T3 454 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 TMX2Q9Y320 296 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 PPP2R3BQ9Y5P8 575 aa10.17□□□□□ -0.78
HDAC6-209ENST00000440653 PFASO15067 1338 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 POTEMA6NI47 508 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 FAM196BA6NMK8 535 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 USP27XA6NNY8 438 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 RAD21O60216 631 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 ASNSP08243 561 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 CYP3A4P08684 503 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 CETPP11597 493 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 CDC25AP30304 524 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 FLT3LGP49771 235 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 DNM2P50570 870 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-209ENST00000440653 RASA3Q14644 834 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 CSGALNACT2Q8N6G5 542 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 PRMT6Q96LA8 375 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-209ENST00000440653 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
HDAC6-209ENST00000440653 NUP58Q9BVL2 599 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC6-209ENST00000440653 VCPKMTQ9H867 229 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 VEZTQ9HBM0 779 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 BLOC1S4Q9NUP1 217 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 PCDHA12Q9UN75 941 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 PPP2R2CQ9Y2T4 447 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 MGAMO43451 1857 aa10.16□□□□□ -0.78
HDAC6-209ENST00000440653 TCF20Q9UGU0 1960 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms