RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 FAM200AQ8TCP9 573 aa31.29■■■□□ 2.6
CGREF1-207ENST00000440612 CREBZFQ9NS37 354 aa31.29■■■□□ 2.6
CGREF1-207ENST00000440612 NFASCO94856 1347 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 MYMKA6NI61 221 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 XRCC6P12956 609 aaKnown RBP eCLIP31.28■■■□□ 2.6
CGREF1-207ENST00000440612 CRHR2Q13324 411 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 SV2BQ7L1I2 683 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 TRIML1Q8N9V2 468 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 CBX8Q9HC52 389 aa31.28■■■□□ 2.6
CGREF1-207ENST00000440612 CTTNQ14247 550 aaKnown RBP31.27■■■□□ 2.6
CGREF1-207ENST00000440612 PLEKHH3Q7Z736 793 aa31.27■■■□□ 2.6
CGREF1-207ENST00000440612 SENP7Q9BQF6 1050 aa31.27■■■□□ 2.6
CGREF1-207ENST00000440612 TELO2Q9Y4R8 837 aa31.27■■■□□ 2.6
CGREF1-207ENST00000440612 ZNF165P49910 485 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 APLP1P51693 650 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 GRM1Q13255 1194 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 CNNM4Q6P4Q7 775 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 SEPT14Q6ZU15 432 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 MIER3Q7Z3K6 550 aa31.26■■■□□ 2.6
CGREF1-207ENST00000440612 B4DLN1 442 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 CAVIN2O95810 425 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 RPN1P04843 607 aaKnown RBP31.25■■■□□ 2.59
CGREF1-207ENST00000440612 MUTP22033 750 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 KRT76Q01546 638 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 DHX8Q14562 1220 aaKnown RBP31.25■■■□□ 2.59
CGREF1-207ENST00000440612 IQCB1Q15051 598 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 PAXIP1Q6ZW49 1069 aaPredicted RBP31.25■■■□□ 2.59
CGREF1-207ENST00000440612 KCTD17Q8N5Z5 321 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 ZFYVE28Q9HCC9 887 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 IVNS1ABPQ9Y6Y0 642 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 AOC2O75106 756 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 PLA2G4BP0C869 781 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 SLC12A3P55017 1021 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 NOGQ13253 232 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 DEFB115Q30KQ5 88 aa31.25■■■□□ 2.59
CGREF1-207ENST00000440612 ZNF236Q9UL36 1845 aa31.24■■■□□ 2.59
CGREF1-207ENST00000440612 ZNF746Q6NUN9 644 aaPredicted RBP31.24■■■□□ 2.59
CGREF1-207ENST00000440612 TPH2Q8IWU9 490 aa31.24■■■□□ 2.59
CGREF1-207ENST00000440612 CAPNS2Q96L46 248 aa31.24■■■□□ 2.59
CGREF1-207ENST00000440612 CA12O43570 354 aa31.23■■■□□ 2.59
CGREF1-207ENST00000440612 AMPD3Q01432 767 aa31.23■■■□□ 2.59
CGREF1-207ENST00000440612 EEPD1Q7L9B9 569 aa31.23■■■□□ 2.59
CGREF1-207ENST00000440612 ZNF467Q7Z7K2 595 aaPredicted RBP31.23■■■□□ 2.59
CGREF1-207ENST00000440612 NEK9Q8TD19 979 aa31.23■■■□□ 2.59
CGREF1-207ENST00000440612 MPHOSPH6Q99547 160 aaKnown RBP31.23■■■□□ 2.59
CGREF1-207ENST00000440612 SLC15A5A6NIM6 579 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 MORN1Q5T089 497 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 LUZP1Q86V48 1076 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 BANK1Q8NDB2 785 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 LXNQ9BS40 222 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 DNM3Q9UQ16 869 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 PLXNA1Q9UIW2 1896 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 ASB14A6NK59 587 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 WDR64B1ANS9 1081 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 ZBTB39O15060 712 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 UBA1P22314 1058 aaKnown RBP31.22■■■□□ 2.59
CGREF1-207ENST00000440612 SFNP31947 248 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 JAK3P52333 1124 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 KCNB1Q14721 858 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 ARSHQ5FYA8 562 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 L1TD1Q5T7N2 865 aaKnown RBP31.22■■■□□ 2.59
CGREF1-207ENST00000440612 ARMCX2Q7L311 632 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 SYT2Q8N9I0 419 aaPredicted RBP31.22■■■□□ 2.59
CGREF1-207ENST00000440612 DNAJC19Q96DA6 116 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 BPIFA3Q9BQP9 254 aa31.22■■■□□ 2.59
CGREF1-207ENST00000440612 JPH1Q9HDC5 661 aaPredicted RBP31.22■■■□□ 2.59
CGREF1-207ENST00000440612 DIS3Q9Y2L1 958 aaKnown RBP31.22■■■□□ 2.59
CGREF1-207ENST00000440612 ARIH2O95376 493 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 P4HBP07237 508 aaKnown RBP31.21■■■□□ 2.59
CGREF1-207ENST00000440612 TGFB3P10600 412 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 CYP11B2P19099 503 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 KMT5BQ4FZB7 885 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 MAMDC4Q6UXC1 1216 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 DHX40Q8IX18 779 aaKnown RBP31.21■■■□□ 2.59
CGREF1-207ENST00000440612 RDM1Q8NG50 284 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 SLC9A2Q9UBY0 812 aa31.21■■■□□ 2.59
CGREF1-207ENST00000440612 EYA4O95677 639 aa31.2■■■□□ 2.59
CGREF1-207ENST00000440612 UGCGQ16739 394 aa31.2■■■□□ 2.59
CGREF1-207ENST00000440612 FBXO16Q8IX29 292 aaPredicted RBP31.2■■■□□ 2.59
CGREF1-207ENST00000440612 PIGOQ8TEQ8 1089 aa31.2■■■□□ 2.59
CGREF1-207ENST00000440612 DDX12PQ92771 950 aa31.2■■■□□ 2.59
CGREF1-207ENST00000440612 MCM3APO60318 1980 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 RHOBTB3O94955 611 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 LYPLA2O95372 231 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 CCDC62Q6P9F0 684 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 MLKLQ8NB16 471 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 NPLOC4Q8TAT6 608 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 MAML3Q96JK9 1138 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 KATNBL1Q9H079 304 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 DDX41Q9UJV9 622 aaKnown RBP31.19■■■□□ 2.58
CGREF1-207ENST00000440612 DOCK5Q9H7D0 1870 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 CD44P16070 742 aaKnown RBP31.19■■■□□ 2.58
CGREF1-207ENST00000440612 ASIC1P78348 528 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 CYFIP1Q7L576 1253 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 SMAP1Q8IYB5 467 aaPredicted RBP31.19■■■□□ 2.58
CGREF1-207ENST00000440612 USP6NLQ92738 828 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 BHMT2Q9H2M3 363 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 RMND1Q9NWS8 449 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 SAMM50Q9Y512 469 aa31.19■■■□□ 2.58
CGREF1-207ENST00000440612 CTGFP29279 349 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms