RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SEPT1Q8WYJ6 367 aa20.46■□□□□ 0.87
CPSF4-205ENST00000440514 GJA10Q969M2 543 aa20.46■□□□□ 0.87
CPSF4-205ENST00000440514 PPP1R12CQ9BZL4 782 aa20.46■□□□□ 0.87
CPSF4-205ENST00000440514 TUT1Q9H6E5 874 aaKnown RBP20.46■□□□□ 0.87
CPSF4-205ENST00000440514 HDAC6Q9UBN7 1215 aa20.46■□□□□ 0.87
CPSF4-205ENST00000440514 SLC37A4O43826 429 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 CYP2C9P11712 490 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 RAG1P15918 1043 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 PTPN11Q06124 597 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-205ENST00000440514 Q4G0T1 1027 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-205ENST00000440514 SESTD1Q86VW0 696 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 BADQ92934 168 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 MBOAT7Q96N66 472 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 GDF15Q99988 308 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 GTF2IRD1Q9UHL9 959 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 COLQQ9Y215 455 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-205ENST00000440514 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
CPSF4-205ENST00000440514 CYP3A7-CYP3A51PA0A087WV96 503 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 CYP3A7P24462 503 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 HIC1Q14526 733 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 MOXD1Q6UVY6 613 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 PCYT2Q99447 389 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 LBHD1Q9BQE6 289 aaPredicted RBP20.44■□□□□ 0.86
CPSF4-205ENST00000440514 DDX25Q9UHL0 483 aaKnown RBP20.44■□□□□ 0.86
CPSF4-205ENST00000440514 ZNF215Q9UL58 517 aaPredicted RBP20.44■□□□□ 0.86
CPSF4-205ENST00000440514 EMSYQ7Z589 1322 aa20.44■□□□□ 0.86
CPSF4-205ENST00000440514 SMIM10L2AP0DMW4 78 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 SMIM10L2BP0DMW5 78 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 MARK3P27448 753 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 GJB2P29033 226 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.86
CPSF4-205ENST00000440514 PTGISQ16647 500 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 SLC5A5Q92911 643 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 PRO3102Q9H379 93 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 HIPK3Q9H422 1215 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 TBC1D22BQ9NU19 505 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 TANC1Q9C0D5 1861 aa20.43■□□□□ 0.86
CPSF4-205ENST00000440514 WNT7AO00755 349 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 CCNT1O60563 726 aaKnown RBP20.42■□□□□ 0.86
CPSF4-205ENST00000440514 LGR5O75473 907 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 SUPT20HL2P0C7V6 817 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 CYP2C18P33260 490 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 ZNF200P98182 395 aaPredicted RBP20.42■□□□□ 0.86
CPSF4-205ENST00000440514 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 ETNPPLQ8TBG4 499 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 GLG1Q92896 1179 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 NOC4LQ9BVI4 516 aaKnown RBP20.42■□□□□ 0.86
CPSF4-205ENST00000440514 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 NOD1Q9Y239 953 aa20.42■□□□□ 0.86
CPSF4-205ENST00000440514 KIF28PB7ZC32 967 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 GAS7O60861 476 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 ATG7O95352 703 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 TIMP1P01033 207 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 GCFC2P16383 781 aaKnown RBP20.41■□□□□ 0.86
CPSF4-205ENST00000440514 KRT76Q01546 638 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 CUL4AQ13619 759 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 POTEDQ86YR6 584 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 CCDC60Q8IWA6 550 aaPredicted RBP20.41■□□□□ 0.86
CPSF4-205ENST00000440514 RIT2Q99578 217 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 TEKT3Q9BXF9 490 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 UBE2OQ9C0C9 1292 aaKnown RBP20.41■□□□□ 0.86
CPSF4-205ENST00000440514 RNPEPQ9H4A4 650 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 AZI2Q9H6S1 392 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 TCEAL9Q9UHQ7 104 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
CPSF4-205ENST00000440514 C17orf102A2RUQ5 167 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 BACH1O14867 736 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 CHMP2AO43633 222 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 PPP4R3AQ6IN85 833 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 ZNF746Q6NUN9 644 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-205ENST00000440514 ABHD15Q6UXT9 468 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 DHX38Q92620 1227 aaKnown RBP20.4■□□□□ 0.86
CPSF4-205ENST00000440514 NAP1L4Q99733 375 aaKnown RBP20.4■□□□□ 0.86
CPSF4-205ENST00000440514 WNT8AQ9H1J5 351 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 UNC45AQ9H3U1 944 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 SMARCAD1Q9H4L7 1026 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 ERAP1Q9NZ08 941 aa20.4■□□□□ 0.86
CPSF4-205ENST00000440514 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-205ENST00000440514 TRIP12Q14669 1992 aaPredicted RBP20.39■□□□□ 0.86
CPSF4-205ENST00000440514 IGKV6D-21A0A0A0MT36 114 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 PSMD10O75832 226 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 HOXC8P31273 242 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 CCL23P55773 120 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 FPGSQ05932 587 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 GNL2Q13823 731 aaKnown RBP20.39■□□□□ 0.85
CPSF4-205ENST00000440514 MIS18BP1Q6P0N0 1132 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 LMBR1Q8WVP7 490 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 WNT8BQ93098 351 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.85
CPSF4-205ENST00000440514 KCNMB3Q9NPA1 279 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 SETD4Q9NVD3 440 aa20.39■□□□□ 0.85
CPSF4-205ENST00000440514 K7ELQ4 463 aaPredicted RBP20.38■□□□□ 0.85
CPSF4-205ENST00000440514 ATP2B1P20020 1258 aa20.38■□□□□ 0.85
CPSF4-205ENST00000440514 STAT5BP51692 787 aa20.38■□□□□ 0.85
CPSF4-205ENST00000440514 EPHB4P54760 987 aa20.38■□□□□ 0.85
CPSF4-205ENST00000440514 MFSD5Q6N075 450 aa20.38■□□□□ 0.85
CPSF4-205ENST00000440514 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms