RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
CCBE1-202ENST00000439986 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
CCBE1-202ENST00000439986 ARHGAP42A6NI28 874 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 TADA3O75528 432 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.4
CCBE1-202ENST00000439986 ALAS1P13196 640 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 CCDC13Q8IYE1 715 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 FAM9CQ8IZT9 166 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 SYCE1Q8N0S2 351 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 PAGE5Q96GU1 130 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 SMCO2A6NFE2 343 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 APBA3O96018 575 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 MMEP08473 750 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 DLATP10515 647 aaKnown RBP12.52□□□□□ -0.4
CCBE1-202ENST00000439986 CDC25AP30304 524 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 APBA1Q02410 837 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 NIM1KQ8IY84 436 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 PPP1R16BQ96T49 567 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.4
CCBE1-202ENST00000439986 UBXN2AP68543 259 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 RASSF7Q02833 373 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 MYBPC2Q14324 1141 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 KRT31Q15323 416 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 RPS6KA2Q15349 733 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
CCBE1-202ENST00000439986 ARHGEF25Q86VW2 580 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 TRIM50Q86XT4 487 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 NME8Q8N427 588 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 TTC30BQ8N4P2 665 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 WDR24Q96S15 920 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 RWDD2AQ9UIY3 292 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 KRIT1O00522 736 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 CLTAP09496 248 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 MAPK9P45984 424 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 CYP27A1Q02318 531 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 EHHADHQ08426 723 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 TNIP2Q8NFZ5 429 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 RUBCNQ92622 972 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 DPH5Q9H2P9 285 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 K7ENM7 598 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 GAS7O60861 476 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 CAND2O75155 1236 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 LIFRP42702 1097 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 LMNB2Q03252 620 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 SNCBQ16143 134 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 NANOGNBQ7Z5D8 188 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 COQ7Q99807 217 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.41
CCBE1-202ENST00000439986 BAG2O95816 211 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 OR52Z1P0C646 297 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 PTPREP23469 700 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 GRK2P25098 689 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ZNF574Q6ZN55 896 aaPredicted RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 DPF2Q92785 391 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 SUGCTQ9HAC7 445 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 PARVBQ9HBI1 364 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 DDAH1O94760 285 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CXCR5P32302 372 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 STOX1Q6ZVD7 989 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CROCCP2Q86T23 111 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CEP70Q8NHQ1 597 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 PTPN22Q9Y2R2 807 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ADGRB3O60242 1522 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 PRKAB2O43741 272 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CUL1Q13616 776 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CRB1P82279 1406 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
CCBE1-202ENST00000439986 KRT75O95678 551 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 CYP2C19P33261 490 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 GYG1P46976 350 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 LIG4P49917 911 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 IFT88Q13099 833 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 OMA1Q96E52 524 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 RAB20Q9NX57 234 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 SH3BP1Q9Y3L3 701 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 SNX5Q9Y5X3 404 aa12.51□□□□□ -0.41
CCBE1-202ENST00000439986 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 E2F4Q16254 413 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 TSPAN18Q96SJ8 248 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 RAB17Q9H0T7 212 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms