RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 DDX39AO00148 427 aaKnown RBP27.32■■□□□ 1.96
CPNE1-217ENST00000439669 RFC2P35250 354 aa27.32■■□□□ 1.96
CPNE1-217ENST00000439669 SETQ01105 290 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-217ENST00000439669 OTOP2Q7RTS6 562 aa27.32■■□□□ 1.96
CPNE1-217ENST00000439669 BLIDQ8IZY5 108 aa27.32■■□□□ 1.96
CPNE1-217ENST00000439669 FAM177A1Q8N128 213 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-217ENST00000439669 ATP6V0A1Q93050 837 aa27.32■■□□□ 1.96
CPNE1-217ENST00000439669 GTF3C6Q969F1 213 aa27.32■■□□□ 1.96
CPNE1-217ENST00000439669 ORC3Q9UBD5 711 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-217ENST00000439669 IGLV3-22A0A075B6J6 115 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 CTDNEP1O95476 244 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 PFKMP08237 780 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 SELPP16109 830 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 XBP1P17861 261 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 MARK3P27448 753 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 SMAD3P84022 425 aaKnown RBP27.31■■□□□ 1.96
CPNE1-217ENST00000439669 PRR16Q569H4 304 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 LRRC8DQ7L1W4 858 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 HERVK_113Q902F9 699 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 UIMC1Q96RL1 719 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 RNPEPQ9H4A4 650 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 SMARCAD1Q9H4L7 1026 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 SETD4Q9NVD3 440 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 KCNJ14Q9UNX9 436 aa27.31■■□□□ 1.96
CPNE1-217ENST00000439669 SCN5AQ14524 2016 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 GNAT1P11488 350 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 CKBP12277 381 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 ACTR2P61160 394 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 RBL2Q08999 1139 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 GALNT17Q6IS24 598 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 Q7L0L9 218 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 DEFB123Q8N688 67 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 DAGLBQ8NCG7 672 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 WNT8BQ93098 351 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 ZNF577Q9BSK1 485 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 C22orf23Q9BZE7 217 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 FTOQ9C0B1 505 aaKnown RBP eCLIP27.3■■□□□ 1.965e-10■□□□□ 9.7
CPNE1-217ENST00000439669 AZI2Q9H6S1 392 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 ERAP1Q9NZ08 941 aa27.3■■□□□ 1.96
CPNE1-217ENST00000439669 LAMA3Q16787 3333 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 IPO5O00410 1097 aaKnown RBP27.29■■□□□ 1.96
CPNE1-217ENST00000439669 HOXC8P31273 242 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 CIITAP33076 1130 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 RASIP1Q5U651 963 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 SERINC5Q86VE9 423 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 WASF1Q92558 559 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 EMSYQ7Z589 1322 aa27.29■■□□□ 1.96
CPNE1-217ENST00000439669 TRIP12Q14669 1992 aaPredicted RBP27.29■■□□□ 1.96
CPNE1-217ENST00000439669 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-217ENST00000439669 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-217ENST00000439669 ZBBXA8MT70 800 aa27.28■■□□□ 1.96
CPNE1-217ENST00000439669 TREHO43280 583 aa27.28■■□□□ 1.96
CPNE1-217ENST00000439669 TRIM71Q2Q1W2 868 aaKnown RBP27.28■■□□□ 1.96
CPNE1-217ENST00000439669 TBCKQ8TEA7 893 aa27.28■■□□□ 1.96
CPNE1-217ENST00000439669 VWCEQ96DN2 955 aa27.28■■□□□ 1.96
CPNE1-217ENST00000439669 CXXC1Q9P0U4 656 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-217ENST00000439669 LGR5O75473 907 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 THPOP40225 353 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 PPFIA1Q13136 1202 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 NPY5RQ15761 445 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 ZNF697Q5TEC3 545 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 LMBR1Q8WVP7 490 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 PCYT2Q99447 389 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 PHF20Q9BVI0 1012 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 TCEAL9Q9UHQ7 104 aa27.27■■□□□ 1.96
CPNE1-217ENST00000439669 NRCAMQ92823 1304 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 CCNE2O96020 404 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 ACTN1P12814 892 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 USP11P51784 963 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 ZNF618Q5T7W0 954 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 FAM109BQ6ICB4 259 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-217ENST00000439669 NSUN7Q8NE18 718 aaKnown RBP27.26■■□□□ 1.95
CPNE1-217ENST00000439669 GJB4Q9NTQ9 266 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 LIMCH1Q9UPQ0 1083 aa27.26■■□□□ 1.95
CPNE1-217ENST00000439669 M0R2N6 131 aa27.25■■□□□ 1.95
CPNE1-217ENST00000439669 PARNO95453 639 aaKnown RBP27.25■■□□□ 1.95
CPNE1-217ENST00000439669 NONOQ15233 471 aaKnown RBP eCLIP27.25■■□□□ 1.95
CPNE1-217ENST00000439669 KRT25Q7Z3Z0 450 aa27.25■■□□□ 1.95
CPNE1-217ENST00000439669 KIF2CQ99661 725 aa27.25■■□□□ 1.95
CPNE1-217ENST00000439669 TBC1D22BQ9NU19 505 aa27.25■■□□□ 1.95
CPNE1-217ENST00000439669 GRXCR1A8MXD5 290 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 BACH1O14867 736 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 DHX15O43143 795 aaKnown RBP27.24■■□□□ 1.95
CPNE1-217ENST00000439669 STAT5BP51692 787 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 GRIK4Q16099 956 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 LENG9Q96B70 501 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 FAM161BQ96MY7 647 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 UPF2Q9HAU5 1272 aaKnown RBP27.24■■□□□ 1.95
CPNE1-217ENST00000439669 TRPC6Q9Y210 931 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 SLC4A7Q9Y6M7 1214 aa27.24■■□□□ 1.95
CPNE1-217ENST00000439669 CCDC194A0A1B0GVG4 234 aa27.23■■□□□ 1.95
CPNE1-217ENST00000439669 EDIL3O43854 480 aa27.23■■□□□ 1.95
CPNE1-217ENST00000439669 JAK2O60674 1132 aa27.23■■□□□ 1.95
CPNE1-217ENST00000439669 ATG7O95352 703 aa27.23■■□□□ 1.95
CPNE1-217ENST00000439669 FDPSP14324 419 aaKnown RBP27.23■■□□□ 1.95
CPNE1-217ENST00000439669 RBM25P49756 843 aaKnown RBP27.23■■□□□ 1.95
CPNE1-217ENST00000439669 MIS18BP1Q6P0N0 1132 aa27.23■■□□□ 1.95
CPNE1-217ENST00000439669 NBNO60934 754 aa27.22■■□□□ 1.95
CPNE1-217ENST00000439669 TDP2O95551 362 aa27.22■■□□□ 1.95
CPNE1-217ENST00000439669 CTSHP09668 335 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms