RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PTPRSQ13332 1948 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 CCDC196A0A1B0GTZ2 297 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 SMCO2A6NFE2 343 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 KIF28PB7ZC32 967 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 EFCAB14O75071 495 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 CAND2O75155 1236 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 LGR5O75473 907 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 ARHGEF15O94989 841 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 REC8O95072 547 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 IGFBP4P22692 258 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 METAP2P50579 478 aaKnown RBP eCLIP23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 DEFB103AP81534 67 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 TAP1Q03518 808 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 IKBKEQ14164 716 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 LMBR1Q8WVP7 490 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 BRF1Q92994 677 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 MXRA8Q9BRK3 442 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 AGXT2Q9BYV1 514 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 NAP1L2Q9ULW6 460 aaPredicted RBP23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 VCANP13611 3396 aa23.24■■□□□ 1.31
NCKIPSD-206ENST00000439518 RPS6KB1P23443 525 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 CLK2P49760 499 aaKnown RBP23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 MKRN4PQ13434 485 aaPredicted RBP23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 PFKFB3Q16875 520 aaPredicted RBP23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 TMCO2Q7Z6W1 182 aaPredicted RBP23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 CYP2W1Q8TAV3 490 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 PGBD1Q96JS3 809 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 ANO3Q9BYT9 981 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 GLT8D2Q9H1C3 349 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 KCNH7Q9NS40 1196 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 PKD2L1Q9P0L9 805 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 NRCAMQ92823 1304 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 NID2Q14112 1375 aa23.23■■□□□ 1.31
NCKIPSD-206ENST00000439518 TLL1O43897 1013 aa23.22■■□□□ 1.31
NCKIPSD-206ENST00000439518 ARHGAP4P98171 946 aa23.22■■□□□ 1.31
NCKIPSD-206ENST00000439518 PLEKHG4Q58EX7 1191 aa23.22■■□□□ 1.31
NCKIPSD-206ENST00000439518 DBF4BQ8NFT6 615 aa23.22■■□□□ 1.31
NCKIPSD-206ENST00000439518 TMEM260Q9NX78 707 aa23.22■■□□□ 1.31
NCKIPSD-206ENST00000439518 SCG2P13521 617 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 POU3F3P20264 500 aaPredicted RBP23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 SREBF1P36956 1147 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 AP3B2Q13367 1082 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 CEP55Q53EZ4 464 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 PPM1EQ8WY54 764 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 OSBPL7Q9BZF2 842 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 PRDM6Q9NQX0 595 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 ERAP1Q9NZ08 941 aa23.21■■□□□ 1.31
NCKIPSD-206ENST00000439518 LCHNA4D1U4 455 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 EPOPA6NHQ4 379 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 MEIS1O00470 390 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 EPB41L2O43491 1005 aaKnown RBP23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 GJB5O95377 273 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 ARP10275 920 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 FAM26DQ5JW98 314 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 ZBED2Q9BTP6 218 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 SMARCAD1Q9H4L7 1026 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 CERS4Q9HA82 394 aa23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 JPH1Q9HDC5 661 aaPredicted RBP23.2■■□□□ 1.3
NCKIPSD-206ENST00000439518 NFASCO94856 1347 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 ESYT2A0FGR8 921 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 RFXAPO00287 272 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 CTSHP09668 335 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 PSMA5P28066 241 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 EVCP57679 992 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 CCDC85BQ15834 202 aaPredicted RBP23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 PKN1Q16512 942 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 RPAINQ86UA6 219 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 GLG1Q92896 1179 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 PCYT2Q99447 389 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 RAD9AQ99638 391 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 SLC9A2Q9UBY0 812 aa23.19■■□□□ 1.3
NCKIPSD-206ENST00000439518 PRRC2BQ5JSZ5 2229 aaKnown RBP23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 PRPF3O43395 683 aaKnown RBP23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 MARK3P27448 753 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 PPFIA1Q13136 1202 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 ITGB3BPQ13352 177 aaPredicted RBP23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 NTRK3Q16288 839 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 NIPA1Q7RTP0 329 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 SPRED2Q7Z698 418 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 CRYGNQ8WXF5 182 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 ARNTL2Q8WYA1 636 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 ZMYND12Q9H0C1 365 aa23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 AGO4Q9HCK5 861 aaKnown RBP23.18■■□□□ 1.3
NCKIPSD-206ENST00000439518 KAT6AQ92794 2004 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 MBLAC1A4D2B0 266 aaPredicted RBP23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 ADAMTS3O15072 1205 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 GRIK4Q16099 956 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 MARCH8Q5T0T0 291 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 TAF2Q6P1X5 1199 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 RUFY4Q6ZNE9 571 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 SEPT8Q92599 483 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 SDF4Q9BRK5 362 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 MTCH2Q9Y6C9 303 aa23.17■■□□□ 1.3
NCKIPSD-206ENST00000439518 REV3LO60673 3130 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 CHRNA1P02708 482 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 PDIA3P30101 505 aaKnown RBP23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 ACTR2P61160 394 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 JAKMIP3Q5VZ66 844 aa23.16■■□□□ 1.3
NCKIPSD-206ENST00000439518 PHKBQ93100 1093 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms