RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
AC012494.1-201ENST00000439259 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
AC012494.1-201ENST00000439259 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
AC012494.1-201ENST00000439259 MRVI1Q9Y6F6 885 aa9.4□□□□□ -0.9
AC012494.1-201ENST00000439259 BAZ2BQ9UIF8 2168 aaKnown RBP9.4□□□□□ -0.91
AC012494.1-201ENST00000439259 SCN10AQ9Y5Y9 1956 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 REV3LO60673 3130 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 CUL9Q8IWT3 2517 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 TMEM265A0A087WTH1 108 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 PNMA6FA0A0J9YX94 578 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 GCOM1H8Y6P7 765 aaPredicted RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 PRC1O43663 620 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 KPNA6O60684 536 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 EIF3JO75822 258 aaKnown RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 POLR2MP0CAP2 368 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 ZNF286BP0CG31 522 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 RXRAP19793 462 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 ZNF200P98182 395 aaPredicted RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 GHRHRQ02643 423 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 SART3Q15020 963 aaKnown RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 PGM5Q15124 567 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 PTGISQ16647 500 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 PPM1EQ8WY54 764 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 LRRC2Q9BYS8 371 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 MAF1Q9H063 256 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 MYH6P13533 1939 aa9.39□□□□□ -0.91
AC012494.1-201ENST00000439259 hCG_1642624A0A1W2PR95 340 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 SLC27A2O14975 620 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 IQCF3P0C7M6 154 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 FOXC1Q12948 553 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 ADGRE1Q14246 886 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 GPNMBQ14956 572 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 DGKDQ16760 1214 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 HSDL1Q3SXM5 330 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 RPUSD2Q8IZ73 545 aaKnown RBP9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 PRDM6Q9NQX0 595 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 RTEL1Q9NZ71 1219 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 HDAC6Q9UBN7 1215 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 MSRAQ9UJ68 235 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 TELO2Q9Y4R8 837 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 SLC4A7Q9Y6M7 1214 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 SCN5AQ14524 2016 aa9.38□□□□□ -0.91
AC012494.1-201ENST00000439259 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 GGPS1O95749 300 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 ATP2A2P16615 1042 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 UBA1P22314 1058 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CCND2P30279 289 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 MRPS9P82933 396 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 LAMC2Q13753 1193 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 KIAA0753Q2KHM9 967 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 TCTN1Q2MV58 587 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CELF3Q5SZQ8 465 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 MYSM1Q5VVJ2 828 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 NFXL1Q6ZNB6 911 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 TMCO2Q7Z6W1 182 aaPredicted RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 SRBD1Q8N5C6 995 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 PPTC7Q8NI37 304 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 WNT8BQ93098 351 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 FTOQ9C0B1 505 aaKnown RBP eCLIP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 MTIF3Q9H2K0 278 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 SLC28A3Q9HAS3 691 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 ANO2Q9NQ90 1003 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 MAP3K20Q9NYL2 800 aaKnown RBP9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
AC012494.1-201ENST00000439259 CCDC69A6NI79 296 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 HAS3O00219 553 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 RFXAPO00287 272 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 HOXA2O43364 376 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 F2P00734 622 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 IGFBP4P22692 258 aa9.36□□□□□ -0.91
AC012494.1-201ENST00000439259 MCM5P33992 734 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms