RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NFS1Q9Y697 457 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 ARAP2Q8WZ64 1704 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 GRID2IPA4D2P6 1211 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 MYZAPP0CAP1 466 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 BAG6P46379 1132 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 NEDD9Q14511 834 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 SPATS2Q86XZ4 545 aaKnown RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 MREGQ8N565 214 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 GJA10Q969M2 543 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 CCDC47Q96A33 483 aaKnown RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 NUDT12Q9BQG2 462 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 SLC12A6Q9UHW9 1150 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 A6NNZ2 444 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 OR52Z1P0C646 297 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 HSPA9P38646 679 aaKnown RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 CDR1P51861 262 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 TUBB8Q3ZCM7 444 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 CNNM4Q6P4Q7 775 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 PARP9Q8IXQ6 854 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 FAM133AQ8N9E0 248 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 USP38Q8NB14 1042 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 RAPGEF5Q92565 580 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 SEC16BQ96JE7 1060 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 FGFBP2Q9BYJ0 223 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 MYH1P12882 1939 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 GOLGA6L10A6NI86 522 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 STXBP3O00186 592 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 RAPGEF1Q13905 1077 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 ANKRD20A8PQ5CZ79 823 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 FAM83BQ5T0W9 1011 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 TMED8Q6PL24 325 aaPredicted RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 LSM14BQ9BX40 385 aaKnown RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
PCNX3-202ENST00000439247 BLOC1S4Q9NUP1 217 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 MAD2L2Q9UI95 211 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 FBXL5Q9UKA1 691 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 CACNA1SQ13698 1873 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 MYL1P05976 194 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 ITGA4P13612 1032 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 NAB2Q15742 525 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 EMC10Q5UCC4 262 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 LRRC55Q6ZSA7 311 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 KCNK18Q7Z418 384 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 WHAMMQ8TF30 809 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 VAT1LQ9HCJ6 419 aa14.88□□□□□ -0.03
PCNX3-202ENST00000439247 TRAPPC3O43617 180 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 CEP104O60308 925 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 NF2P35240 595 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 MECOMQ03112 1051 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 SNCBQ16143 134 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 MAGOHBQ96A72 148 aaKnown RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 TBC1D31Q96DN5 1066 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 TMEM260Q9NX78 707 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 MINPP1Q9UNW1 487 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 POTEMA6NI47 508 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 PRDX5P30044 214 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 KIF5BP33176 963 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 SCTRP47872 440 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 RPS8P62241 208 aaKnown RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 GRB10Q13322 594 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 SLC9C1Q4G0N8 1177 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 SFMBT2Q5VUG0 894 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 RNF10Q8N5U6 811 aaKnown RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 CELF4Q9BZC1 486 aaKnown RBP14.87□□□□□ -0.03
PCNX3-202ENST00000439247 TRIM31Q9BZY9 425 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 STK32BQ9NY57 414 aa14.87□□□□□ -0.03
PCNX3-202ENST00000439247 DAPK3O43293 454 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 PLCB1Q9NQ66 1216 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
PCNX3-202ENST00000439247 AMACRQ9UHK6 382 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 PAX7P23759 505 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 ACCSLQ4AC99 568 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 NELFCDQ8IXH7 590 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 BSDC1Q9NW68 430 aaPredicted RBP14.86□□□□□ -0.03
PCNX3-202ENST00000439247 STX8Q9UNK0 236 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 ORC4O43929 436 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
PCNX3-202ENST00000439247 SV2BQ7L1I2 683 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 PNMA5Q96PV4 448 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 ISCUQ9H1K1 167 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 DPH5Q9H2P9 285 aa14.86□□□□□ -0.03
PCNX3-202ENST00000439247 SKAP2O75563 359 aaPredicted RBP14.85□□□□□ -0.03
PCNX3-202ENST00000439247 ACTN1P12814 892 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 WLSQ5T9L3 541 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 MIEF2Q96C03 454 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 NSUN4Q96CB9 384 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms