RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 ZNF618Q5T7W0 954 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 KRT40Q6A162 431 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 NFXL1Q6ZNB6 911 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 CUL5Q93034 780 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 WNT8BQ93098 351 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 BCAS3Q9H6U6 928 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
AC011228.1-201ENST00000439027 ABHD14A-ACY1A0A1B0GW23 586 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 LCHNA4D1U4 455 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 RBAK-RBAKDNI3L0D1 243 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 CXCL10P02778 98 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 HOXD8P13378 290 aaPredicted RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 PSMA5P28066 241 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 KIF5BP33176 963 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 ANP32AP39687 249 aaKnown RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 SP4Q02446 784 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 TFF2Q03403 129 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 RBL2Q08999 1139 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 NEDD9Q14511 834 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 RABEP1Q15276 862 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 AAK1Q2M2I8 961 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 TRIM71Q2Q1W2 868 aaKnown RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 UTP14CQ5TAP6 766 aaKnown RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 MB21D2Q8IYB1 491 aaPredicted RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 IGDCC4Q8TDY8 1250 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 ATP6V0A1Q93050 837 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 IL17RAQ96F46 866 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 SEC63Q9UGP8 760 aaKnown RBP10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 MTUS1Q9ULD2 1270 aa10.57□□□□□ -0.72
AC011228.1-201ENST00000439027 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 CCDC69A6NI79 296 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 RSPH10B2B2RC85 870 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 H3BRB1 525 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 PRC1O43663 620 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 EFCAB14O75071 495 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 LGR5O75473 907 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 DDAH1O94760 285 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 LGALS2P05162 132 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 RSPH10BP0C881 870 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 SMIM10L2AP0DMW4 78 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 SMIM10L2BP0DMW5 78 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 CPA1P15085 419 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 NEK4P51957 841 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 MRPS9P82933 396 aaKnown RBP10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 GRB10Q13322 594 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 HIC1Q14526 733 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 USP17L6PQ6QN14 398 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 RAD9AQ99638 391 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 LZTS2Q9BRK4 669 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 C16orf70Q9BSU1 422 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 TUT1Q9H6E5 874 aaKnown RBP10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 EMSYQ7Z589 1322 aa10.56□□□□□ -0.72
AC011228.1-201ENST00000439027 TANC1Q9C0D5 1861 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 TREHO43280 583 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 FIBPO43427 364 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 STAM2O75886 525 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 GJB5O95377 273 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 AMHP03971 560 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 CTSHP09668 335 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 POU3F3P20264 500 aaPredicted RBP10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 ICAM3P32942 547 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 MCM5P33992 734 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 GNAQP50148 359 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 COL9A3Q14050 684 aaPredicted RBP10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 METTL7BQ6UX53 244 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 RAB11FIP4Q86YS3 637 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 GDPD5Q8WTR4 605 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 INPP4AQ96PE3 977 aaPredicted RBP10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms