RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ACRP10323 421 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 HOXC8P31273 242 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 PTPN11Q06124 597 aaPredicted RBP15.11■□□□□ 0.01
LINC00399-201ENST00000439008 GPNMBQ14956 572 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 PTGISQ16647 500 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 TRIM71Q2Q1W2 868 aaKnown RBP15.11■□□□□ 0.01
LINC00399-201ENST00000439008 TNFRSF25Q93038 417 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 SCLYQ96I15 445 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 LRCH3Q96II8 777 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 SLC9A2Q9UBY0 812 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 NFASCO94856 1347 aa15.11■□□□□ 0.01
LINC00399-201ENST00000439008 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 A0A1W2PPC1 479 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
LINC00399-201ENST00000439008 TDP2O95551 362 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 SMIM10L2AP0DMW4 78 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 SMIM10L2BP0DMW5 78 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 ZNF76P36508 570 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 ACTR2P61160 394 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 FPGSQ05932 587 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 NR5A1Q13285 461 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 RABEP1Q15276 862 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 INF2Q27J81 1249 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 PRR16Q569H4 304 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 GIMAP8Q8ND71 665 aaPredicted RBP15.1■□□□□ 0.01
LINC00399-201ENST00000439008 SEPT1Q8WYJ6 367 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00399-201ENST00000439008 JPH1Q9HDC5 661 aaPredicted RBP15.1■□□□□ 0.01
LINC00399-201ENST00000439008 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
LINC00399-201ENST00000439008 IPO5O00410 1097 aaKnown RBP15.09■□□□□ 0.01
LINC00399-201ENST00000439008 WNT7AO00755 349 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 MSH4O15457 936 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 LGR5O75473 907 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 ATG7O95352 703 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 USP11P51784 963 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 ADAM17P78536 824 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 GALNT17Q6IS24 598 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 FAM177A1Q8N128 213 aaPredicted RBP15.09■□□□□ 0.01
LINC00399-201ENST00000439008 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 MBOAT7Q96N66 472 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 KATNAL1Q9BW62 490 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 SETD4Q9NVD3 440 aa15.09■□□□□ 0.01
LINC00399-201ENST00000439008 CYP3A7-CYP3A51PA0A087WV96 503 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 TREHO43280 583 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 SUPT20HL2P0C7V6 817 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 CYP3A7P24462 503 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 MARK3P27448 753 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 GUCY1B3Q02153 619 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 KRT40Q6A162 431 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 ABHD15Q6UXT9 468 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 ZBTB10Q96DT7 871 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 ZNF577Q9BSK1 485 aa15.08■□□□□ 0
LINC00399-201ENST00000439008 IGKV6D-21A0A0A0MT36 114 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 BTBD18B2RXH4 712 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 SLC37A4O43826 429 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00399-201ENST00000439008 TCTN1Q2MV58 587 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 LRIT3Q3SXY7 679 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 MARCH8Q5T0T0 291 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 PIK3AP1Q6ZUJ8 805 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 ZNF365Q70YC5 407 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 SERINC5Q86VE9 423 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 CCDC60Q8IWA6 550 aaPredicted RBP15.07■□□□□ 0
LINC00399-201ENST00000439008 LMBR1Q8WVP7 490 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 ZSCAN31Q96LW9 406 aaPredicted RBP15.07■□□□□ 0
LINC00399-201ENST00000439008 SDF4Q9BRK5 362 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 EMSYQ7Z589 1322 aa15.07■□□□□ 0
LINC00399-201ENST00000439008 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
LINC00399-201ENST00000439008 MMP1P03956 469 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 IQCF3P0C7M6 154 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 CKBP12277 381 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 ATP4AP20648 1035 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 RBL2Q08999 1139 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 MBTPS1Q14703 1052 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 Q4G0T1 1027 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 RASIP1Q5U651 963 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
LINC00399-201ENST00000439008 TMEM199Q8N511 208 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 ETNPPLQ8TBG4 499 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 WASF1Q92558 559 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 SLC5A5Q92911 643 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 TMX3Q96JJ7 454 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 LLPHQ9BRT6 129 aaKnown RBP15.06■□□□□ 0
LINC00399-201ENST00000439008 IL23AQ9NPF7 189 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
LINC00399-201ENST00000439008 CXXC1Q9P0U4 656 aaPredicted RBP15.06■□□□□ 0
LINC00399-201ENST00000439008 CHD7Q9P2D1 2997 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 SIP14410 1827 aa15.06■□□□□ 0
LINC00399-201ENST00000439008 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 PITPNM1O00562 1244 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 PSMD10O75832 226 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 SETQ01105 290 aaPredicted RBP15.05■□□□□ -0
LINC00399-201ENST00000439008 PTK7Q13308 1070 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 PPIGQ13427 754 aaKnown RBP eCLIP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms