RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 BCORL1Q5H9F3 1711 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 NPEPPSL1A6NEC2 478 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 DLX3O60479 287 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPP2CBP62714 309 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPP2CAP67775 309 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 ARID5AQ03989 594 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PKN3Q6P5Z2 889 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 ARHGEF18Q6ZSZ5 1173 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 HOMEZQ8IX15 550 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 KBTBD2Q8IY47 623 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 KLHL36Q8N4N3 616 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PIP4K2CQ8TBX8 421 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 IGDCC4Q8TDY8 1250 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 RBPJLQ9UBG7 517 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PPARGC1AQ9UBK2 798 aaKnown RBP4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 PREX1Q8TCU6 1659 aa4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 ZNF335Q9H4Z2 1342 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P18-201ENST00000438801 BAZ1BQ9UIG0 1483 aaKnown RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 SLC27A2O14975 620 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 GPR42O15529 346 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 AKAP8O43823 692 aaKnown RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 TCF3P15923 654 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 EPHB4P54760 987 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 NFATC3Q12968 1075 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 ICAM4Q14773 271 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 VASNQ6EMK4 673 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 RSPO2Q6UXX9 243 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 USP53Q70EK8 1073 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 OTOP3Q7RTS5 596 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 CIR1Q86X95 450 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 PROSER1Q86XN7 944 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 MCF2L2Q86YR7 1114 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 CELF2-AS1Q8N7Q2 184 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 TTLL11Q8NHH1 800 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 HNRNPLLQ8WVV9 542 aaKnown RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 CLEC4DQ8WXI8 215 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 KISS1RQ969F8 398 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 TINF2Q9BSI4 451 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 PHF20Q9BVI0 1012 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 BARX1Q9HBU1 254 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 DLL4Q9NR61 685 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 ST7Q9NRC1 585 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 ZDHHC9Q9Y397 364 aa4.71□□□□□ -1.66
HMGB1P18-201ENST00000438801 B4GALT4O60513 344 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 COL6A1P12109 1028 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 GRIN1Q05586 938 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 HSP90AA2PQ14568 343 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 DDR2Q16832 855 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 DTX3Q8N9I9 347 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 SH3RF3Q8TEJ3 882 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 DCAF4Q8WV16 495 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 SGSM3Q96HU1 749 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 CD248Q9HCU0 757 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 JADE2Q9NQC1 790 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 TSC22D4Q9Y3Q8 395 aa4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 ARID4BQ4LE39 1312 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P18-201ENST00000438801 NHSL1Q5SYE7 1610 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 FSHBP01225 129 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 FAHP16930 419 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 GRK2P25098 689 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 GRK3P35626 688 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 TUSC3Q13454 348 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 CDSNQ15517 529 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 KIZQ2M2Z5 673 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 PAN2Q504Q3 1202 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 PHF19Q5T6S3 580 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 SLFN13Q68D06 897 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 LBX2Q6XYB7 198 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 ANKS3Q6ZW76 656 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 SPRED1Q7Z699 444 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 RBM12BQ8IXT5 1001 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 SLC16A11Q8NCK7 471 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 NUDT10Q8NFP7 164 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 DNERQ8NFT8 737 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 UHMK1Q8TAS1 419 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 NUDT11Q96G61 164 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 CDK5RAP1Q96SZ6 601 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 PTPN18Q99952 460 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 AARSD1Q9BTE6 412 aaKnown RBP4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 KLC2Q9H0B6 622 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 ADAM29Q9UKF5 820 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 NUB1Q9Y5A7 615 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 UNC79Q9P2D8 2635 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 TEX14Q8IWB6 1497 aa4.69□□□□□ -1.66
HMGB1P18-201ENST00000438801 KIAA0556O60303 1618 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 IQCA1LA6NCM1 817 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 PRODHO43272 600 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 KLHL18O94889 574 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 LTFP02788 710 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 CKMP06732 381 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 GNAT1P11488 350 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 COL6A2P12110 1019 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 SPIRE1Q08AE8 756 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 SMAD2Q15796 467 aaKnown RBP4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 KCNT2Q6UVM3 1135 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 KCNJ15Q99712 375 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 ZFYVE21Q9BQ24 234 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 PDGFDQ9GZP0 370 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 DEF6Q9H4E7 631 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms