RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ITGB5P18084 799 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 SMARCA1P28370 1054 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 ARHGAP4P98171 946 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 TCEANC2Q96MN5 208 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 MTA3Q9BTC8 594 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 ANO2Q9NQ90 1003 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 TTC3P53804 2025 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 BDP1A6H8Y1 2624 aa20.9■□□□□ 0.94
GTF3A-204ENST00000438571 CNTNAP5Q8WYK1 1306 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-204ENST00000438571 LIFRP42702 1097 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 RUFY4Q6ZNE9 571 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 SENP7Q9BQF6 1050 aa20.89■□□□□ 0.93
GTF3A-204ENST00000438571 AMHP03971 560 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 MARK3P27448 753 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 TCF7P36402 384 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-204ENST00000438571 GNAQP50148 359 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 HTRA4P83105 476 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-204ENST00000438571 NLRX1Q86UT6 975 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 ZBTB10Q96DT7 871 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 LZTS2Q9BRK4 669 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 PSTPIP2Q9H939 334 aa20.88■□□□□ 0.93
GTF3A-204ENST00000438571 ZNF215Q9UL58 517 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-204ENST00000438571 GSTTP1A0A1W2PQM5 241 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 UPP2O95045 317 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 TYW1BQ6NUM6 668 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 SP7Q8TDD2 431 aaPredicted RBP20.87■□□□□ 0.93
GTF3A-204ENST00000438571 SEPT8Q92599 483 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 GPRASP2Q96D09 838 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 PGBD1Q96JS3 809 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 COG5Q9UP83 839 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 UBIAD1Q9Y5Z9 338 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 SLC12A7Q9Y666 1083 aa20.87■□□□□ 0.93
GTF3A-204ENST00000438571 COL9A1P20849 921 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 AAK1Q2M2I8 961 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 XRRA1Q6P2D8 792 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 HLA-CQ95604 372 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 PCDHA6Q9UN73 950 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 PCDHA8Q9Y5H6 950 aa20.86■□□□□ 0.93
GTF3A-204ENST00000438571 CAND2O75155 1236 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 CHRNA1P02708 482 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 CALM1P0DP23 149 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 CALM2P0DP24 149 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 CALM3P0DP25 149 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 MGAT3Q09327 533 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 FAM26DQ5JW98 314 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 WWC2Q6AWC2 1192 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 SGMS1Q86VZ5 419 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 TMTC2Q8N394 836 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 FANCBQ8NB91 859 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 FBXO22Q8NEZ5 403 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 TOP1MTQ969P6 601 aa20.85■□□□□ 0.93
GTF3A-204ENST00000438571 PLXNA4Q9HCM2 1894 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 GHRP10912 638 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 GNAT1P11488 350 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 MTMR1Q13613 665 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 ADCK5Q3MIX3 580 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 APOA5Q6Q788 366 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 PCYT2Q99447 389 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 IFIH1Q9BYX4 1025 aaKnown RBP20.84■□□□□ 0.93
GTF3A-204ENST00000438571 LMCD1Q9NZU5 365 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
GTF3A-204ENST00000438571 FNDC1Q4ZHG4 1894 aaPredicted RBP20.84■□□□□ 0.93
GTF3A-204ENST00000438571 NRCAMQ92823 1304 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 PPFIA1Q13136 1202 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 GRIK4Q16099 956 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 RASEFQ8IZ41 740 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 CYP2W1Q8TAV3 490 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 SEPT1Q8WYJ6 367 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 KHSRPQ92945 711 aaKnown RBP eCLIP20.83■□□□□ 0.939e-6■□□□□ 10.6
GTF3A-204ENST00000438571 YME1L1Q96TA2 773 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 JADE2Q9NQC1 790 aa20.83■□□□□ 0.93
GTF3A-204ENST00000438571 SPDYE3A6NKU9 549 aa20.82■□□□□ 0.92
GTF3A-204ENST00000438571 FUT2Q10981 343 aa20.82■□□□□ 0.92
GTF3A-204ENST00000438571 EPC2Q52LR7 807 aa20.82■□□□□ 0.92
GTF3A-204ENST00000438571 MARCH8Q5T0T0 291 aa20.82■□□□□ 0.92
GTF3A-204ENST00000438571 GIMAP8Q8ND71 665 aaPredicted RBP20.82■□□□□ 0.92
GTF3A-204ENST00000438571 UBE2ZQ9H832 354 aaPredicted RBP20.82■□□□□ 0.92
GTF3A-204ENST00000438571 TUBE1Q9UJT0 475 aa20.82■□□□□ 0.92
GTF3A-204ENST00000438571 IGBP1P78318 339 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 EXOSC10Q01780 885 aaKnown RBP20.81■□□□□ 0.92
GTF3A-204ENST00000438571 LPIN1Q14693 890 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 DNAJB3Q8WWF6 145 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 CDHR1Q96JP9 859 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 NEK1Q96PY6 1258 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 EHMT1Q9H9B1 1298 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 TMEM260Q9NX78 707 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 ERAP1Q9NZ08 941 aa20.81■□□□□ 0.92
GTF3A-204ENST00000438571 MBLAC1A4D2B0 266 aaPredicted RBP20.8■□□□□ 0.92
GTF3A-204ENST00000438571 ARP10275 920 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 NAPAP54920 295 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 BMP2KLQ5H9B9 411 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 TRAPPC12Q8WVT3 735 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 LINC01599Q8WXQ3 324 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 APBB2Q92870 758 aa20.8■□□□□ 0.92
GTF3A-204ENST00000438571 GLG1Q92896 1179 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms