RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PCDHA10Q9Y5I2 948 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 SLC26A4O43511 780 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 ADAMTS4O75173 837 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 PPFIA4O75335 1185 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 GJB1P08034 283 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 TECP42680 631 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 ACTR2P61160 394 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 MTFR1Q15390 333 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 HSDL1Q3SXM5 330 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 ZNF579Q8NAF0 562 aaKnown RBP20.71■□□□□ 0.91
HDAC6-208ENST00000438518 PCSK9Q8NBP7 692 aaKnown RBP20.71■□□□□ 0.91
HDAC6-208ENST00000438518 ARRDC4Q8NCT1 418 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 ERMNQ8TAM6 284 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 LEO1Q8WVC0 666 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-208ENST00000438518 GBP4Q96PP9 640 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 GPR20Q99678 358 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 UNC45AQ9H3U1 944 aa20.71■□□□□ 0.91
HDAC6-208ENST00000438518 FBXO2Q9UK22 296 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-208ENST00000438518 CENPFP49454 3210 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 VWA3AA6NCI4 1184 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 DDX39AO00148 427 aaKnown RBP20.7■□□□□ 0.9
HDAC6-208ENST00000438518 DKC1O60832 514 aaKnown RBP eCLIP20.7■□□□□ 0.9
HDAC6-208ENST00000438518 CCNE2O96020 404 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 PSAPP07602 524 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 MMP3P08254 477 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 MUTP22033 750 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 EPHA7Q15375 998 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 FSCN1Q16658 493 aaKnown RBP20.7■□□□□ 0.9
HDAC6-208ENST00000438518 DGKDQ16760 1214 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 TMEM63BQ5T3F8 832 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 GJC2Q5T442 439 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-208ENST00000438518 MIER3Q7Z3K6 550 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 DISC1Q9NRI5 854 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 LRWD1Q9UFC0 647 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 SAMM50Q9Y512 469 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 EMSYQ7Z589 1322 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 WDR81Q562E7 1941 aa20.7■□□□□ 0.9
HDAC6-208ENST00000438518 CUTAO60888 179 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 C6orf222P0C671 652 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-208ENST00000438518 SLC26A2P50443 739 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 NCAPH2Q6IBW4 605 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 ABHD15Q6UXT9 468 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 KCTD17Q8N5Z5 321 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 KLHDC9Q8NEP7 349 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 AFG1LQ8WV93 481 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 GJA10Q969M2 543 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 TSEN34Q9BSV6 310 aaKnown RBP20.69■□□□□ 0.9
HDAC6-208ENST00000438518 TMEM106CQ9BVX2 250 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 OGDHLQ9ULD0 1010 aa20.69■□□□□ 0.9
HDAC6-208ENST00000438518 LOXHD1Q8IVV2 1947 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 IGKV6D-21A0A0A0MT36 114 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 MOXD2PA6NHM9 499 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 CHMP2AO43633 222 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 SUPT20HL2P0C7V6 817 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-208ENST00000438518 TCF7P36402 384 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-208ENST00000438518 ME1P48163 572 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 FAM160B1Q5W0V3 765 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 KRT79Q5XKE5 535 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 AFAP1L1Q8TED9 768 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 LENG1Q96BZ8 264 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-208ENST00000438518 DEFB118Q96PH6 123 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 CRISPLD2Q9H0B8 497 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 AZI2Q9H6S1 392 aa20.68■□□□□ 0.9
HDAC6-208ENST00000438518 GSTTP1A0A1W2PQM5 241 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 POTEMA6NI47 508 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 LGR5O75473 907 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 SGPL1O95470 568 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
HDAC6-208ENST00000438518 TXLNAP40222 546 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 GJA8P48165 433 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 SP4Q02446 784 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 IL17AQ16552 155 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 ADALQ6DHV7 355 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 PLPPR4Q7Z2D5 763 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 TMEM87AQ8NBN3 555 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 ATP6V0A1Q93050 837 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 UIMC1Q96RL1 719 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 KATNAL1Q9BW62 490 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 SMARCAD1Q9H4L7 1026 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 BCAS3Q9H6U6 928 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 TUFT1Q9NNX1 390 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 ZNF215Q9UL58 517 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-208ENST00000438518 KDM3AQ9Y4C1 1321 aa20.67■□□□□ 0.9
HDAC6-208ENST00000438518 MYH9P35579 1960 aaKnown RBP20.66■□□□□ 0.9
HDAC6-208ENST00000438518 POTEFA5A3E0 1075 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 DNM1LO00429 736 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 CTAGE5O15320 804 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 CABYRO75952 493 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 PGK1P00558 417 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 RPA1P27694 616 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 GNASQ5JWF2 1037 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 U2AF1L4Q8WU68 220 aaKnown RBP20.66■□□□□ 0.9
HDAC6-208ENST00000438518 POLR3CQ9BUI4 534 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-208ENST00000438518 PCDHA7Q9UN72 937 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 IGSF9BQ9UPX0 1349 aa20.66■□□□□ 0.9
HDAC6-208ENST00000438518 KBTBD13C9JR72 458 aa20.65■□□□□ 0.9
HDAC6-208ENST00000438518 EML1O00423 815 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms